Gene Lcho_4059 details

Gene Information

• Locus tag: Lcho_4059
• ID: 6162594
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 4547985
• End bp: 4549958
• Gene Length: 1974 bp
• Protein Length: 657 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 641666837
• Product: serine/threonine protein kinase
• Protein accession: YP_001793076
• Protein GI: 171060727
• COG category: [K] Transcription; [L] Replication, recombination and repair; [R] General function prediction only; [T] Signal transduction mechanisms
• COG ID: [COG0515] Serine/threonine protein kinase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.0000205723
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGCCCAGC CCCCGCAAGA CCCGCAAGAC CCGCCCGAAG TCAGCGTGGA CAGCGACGAC 
GATCGCACCC GCATCGGCGC CGCACCCGTG CCTGCAGCCG CGCCGGCCAC CGACGCAGAC 
GCAGACGCAG ACGCCAGCAT CGCTGCCACC GAATCGAGCG GCTTCGCGGC CACCCGCGCC 
GCCACCACCC TCGCGCCACG CACCACGACC TCCGCGCCTG GCAGCGCCGG CAGCCAGCCG 
CACGACGACC AGGCCGGCGC CCTGCCGCCG GGTTATCAGC TGCACGAGTT CGTGATCGAG 
GCCACACTCG GCATGGGCGG CTTCGGCATC GTCTACCGGG CGCGCGACCA GCAGCTGCAG 
CGCACGGTGG CGATCAAGGA GTACATGCCG TCGAGCCTGG CCGTGCGGCG CAGCGACGGC 
AGCATCGGGC TGCGCTCGGA CCGCCAGCGC GACACCTTCG AGCTCGGCCT GCGCAGCTTC 
GTCAACGAGG CGCAGCTGCT GGCTGCCTTC GAGCACCCGG CGCTGCTGAA GGTCTACCGC 
TTCTGGGAGC AGCACGGCAG CGCCTACATG GTGATGCCCT GCTACGAGGG CCTGACGCTC 
AAGGCCTGGC TGCAGCAGCA GGCCGCGCCG CCGACCGAGG CCTGGTGGCG CCCGCGCCTG 
CTGGCGCTGG CCGATGCGCT GGCGATGATG CACCGCGCCC GCTGCTACCA CCGCGACATC 
GCGCCCGACA ACATCCTGCT GGTCGGCCCG ACGCAGCAGC CGGTGCTGCT CGACTTCGGC 
GCCGCGCGCC GGGTGCTCGG CGACGCCACC CAGTCGCTCA CCGTGATCCT CAAGCCGGGT 
TACGCGCCGA TCGAGCAGTA CGCCGAATCG GCCTCGCTCA AGCAGGGCGC GTGGACCGAC 
GTGTACGCGC TCAGCGCGGT GCTCTACGCC TCGATCGCCG GCGCGTCGCC GCAGCCTTCG 
GTGGCACGCA TGATCAACGA CGAGCTGATC AGCGCCCGCG TGCGCGGCGC CGGCCGCTAC 
AGCGAGACCT TCCTGGCCGG CATCGACGCC GGCCTGTCGG TCAAGCCCGA GCAACGGCCG 
CAGGACATGG CCGCGCTGAT CGCACTGCTG GGCCTGCACG GCATCGCCGG CACGGTGGTC 
GGGCGTGCGC CGGACGCGGC AGCGATTGCG GCCGCTTCGA ACTTCGGGTC GACCGGCGCG 
ACGGCGCCGT CGGATCAGCC GGCATCACCG GCCACGCGGC GCCTGATGGT CGGGGTGCTC 
GCCGCGCTGG CGTTGGGCGG CGGCCTGGCC TGGTGGCTGA CCCGCGCGCC GGCGCCGGCC 
CGAGAGACGG CGCCGCCGCT CGCATCACCC GCAGCGCCGA CGGCCGCCAA CACAGCAGCG 
GCGCCGCCCT CGCCCGCTCT CCCGACCGTG GCGGCCCCCG AACGCGGCGC CTACACGCCG 
GTCAAGGTGC TCGAAGAGAT CGTCCGGCTG GCCGACCCGC AGATCGCGGT GCAGGCCTCC 
GCCGACCGCG CGCAGGTGGT GATCGGCCGC GACCGGCTGC AGTTCCGGCT GCGCGCCAAC 
GTGGCCGGGC ATGTCTACGT CTACCTCGTC GGCACCGAGG GGCGACAGAT CGAGCTGCTG 
TTTCCGAACG CGATCGACGC CGACAACCGC GTCGCCGTGA ATCAGGAGCT GGTGCTGCCA 
CGCCCGGCCT GGCGCATCAC CGCGGCCGGC CCGCCGGGCA TCGACCACCT GGTGGCGCTG 
GTCTCGCCCA CGCCGCTGCG CATGCGCGAC ACCGGCGCCA GCGCACCGGC CGGCGAGGCG 
CTGCTGGCCT TCGACGACGC GCTCGCCCGC TCGCTCTGGC AGGCCGGCGA CGGCCAGCGC 
AGCGGCTTCG TCGGCGAGCC CGATTGCCCC GCTGCCGGCG CGCCCTGCGC GCGCAACTAC 
GGCGCCAGCC TGCTGCGCAT CGAGGAAGTC ACCGCCGCAC CCGCCGGCCG CTGA 

 

Protein sequence

MAQPPQDPQD PPEVSVDSDD DRTRIGAAPV PAAAPATDAD ADADASIAAT ESSGFAATRA 
ATTLAPRTTT SAPGSAGSQP HDDQAGALPP GYQLHEFVIE ATLGMGGFGI VYRARDQQLQ 
RTVAIKEYMP SSLAVRRSDG SIGLRSDRQR DTFELGLRSF VNEAQLLAAF EHPALLKVYR 
FWEQHGSAYM VMPCYEGLTL KAWLQQQAAP PTEAWWRPRL LALADALAMM HRARCYHRDI 
APDNILLVGP TQQPVLLDFG AARRVLGDAT QSLTVILKPG YAPIEQYAES ASLKQGAWTD 
VYALSAVLYA SIAGASPQPS VARMINDELI SARVRGAGRY SETFLAGIDA GLSVKPEQRP 
QDMAALIALL GLHGIAGTVV GRAPDAAAIA AASNFGSTGA TAPSDQPASP ATRRLMVGVL 
AALALGGGLA WWLTRAPAPA RETAPPLASP AAPTAANTAA APPSPALPTV AAPERGAYTP 
VKVLEEIVRL ADPQIAVQAS ADRAQVVIGR DRLQFRLRAN VAGHVYVYLV GTEGRQIELL 
FPNAIDADNR VAVNQELVLP RPAWRITAAG PPGIDHLVAL VSPTPLRMRD TGASAPAGEA 
LLAFDDALAR SLWQAGDGQR SGFVGEPDCP AAGAPCARNY GASLLRIEEV TAAPAGR