Gene Lcho_4048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4048 
Symbol 
ID6163235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp4535262 
End bp4535933 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content72% 
IMG OID641666826 
Producthypothetical protein 
Protein accessionYP_001793065 
Protein GI171060716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000000361653 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACACCCC TGTCGGTCCG CCGGTTCTGG CTGGCCGGCT TGCTGGCGGG CAGTGCCACG 
CTGGCCGGCG CCCAGGTCGG TGGCATCTAC ACCTGCATCG ACGGCAAGGG CCGCAAGATC 
ACCTCGGATC GGCCGATCCC CGAGTGCCTC GACCGCCAGC AGGACCTGCG CAACAGCGAC 
GGCTCGGTGC GCACCCGCGT GCCGCCCAGC CTGACCGCCG AGGAGCGCGC CATCGCCGAG 
GAGCGCCAGC GGCGCCAGAT GGTGATCGAC GCCGCGCGCA AGGACGCCGT GCGGCATGAC 
CGCAACCTGC TCAACCGCTA CCCCGACGAG GCCGCGCACC AGCGTGCCCG CGAGGCCGCG 
CTCGATCCGC TGCGCCAGGC GCTCCGGATC GCCGACAAGC GGCTGGCCGA ACTGCAGCGC 
GAACGCAAGG TGCTCGAAGC CGAGACCGAG TTCTACAGCG GCCGCGAACT GCCGCGCAAG 
CTGAAGGTCC GTTTTGACGA CAACCAGACC AGCATTGCCG CCCAGCAGGG TGCGGTGGCC 
AACCACCAGA CCGAGTCCGA GCGCATCAAC GCCCGTTACG ACGAGGAACT GGCGCGCCTG 
AAGCGCCTGT GGGCCGGCGC GATGCCCGGC AGCATCGGCC CGGTGCCCGG CACCGCCACG 
GTGGCGCACT GA
 
Protein sequence
MTPLSVRRFW LAGLLAGSAT LAGAQVGGIY TCIDGKGRKI TSDRPIPECL DRQQDLRNSD 
GSVRTRVPPS LTAEERAIAE ERQRRQMVID AARKDAVRHD RNLLNRYPDE AAHQRAREAA 
LDPLRQALRI ADKRLAELQR ERKVLEAETE FYSGRELPRK LKVRFDDNQT SIAAQQGAVA 
NHQTESERIN ARYDEELARL KRLWAGAMPG SIGPVPGTAT VAH