Gene Lcho_4046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4046 
Symbol 
ID6163233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp4533056 
End bp4533556 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content71% 
IMG OID641666824 
Productredoxin domain-containing protein 
Protein accessionYP_001793063 
Protein GI171060714 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.0000000205313 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCCCA TCCGCGTTGT CGCCATCGCC GCCCTGGTGC TCGGCTGTGC CGGCGCGACG 
GCCGTGGTGC TGGCCCGCCG CGATGCGGCG CCGGTGGTCG ACTACACCCT GCTCGACGGC 
AGCCGGCACC GCAGCGACGC GCTGCGCGGC CAGGTCGTGC TGGTCAACTT CTGGGCCACC 
AGCTGCACCG TCTGCGTCAA GGAGATGCCC GAGCTGATGG CCACCTACCG GCGGTTCCGC 
GACCGCGGCT TCGAGACCCT GGCGGTGTCG ATGAGCTACG ACCCGCCGGC CTACGTGGTG 
AACTACGCGC GCTCGCGCGA GCTGCCGTTC CCGGTCGCGA TCGACAACAC CGGCGAGATC 
GCGCGCCGCT TCGGCGACGT GCAGCTGACG CCGACCACCG TCGTGATCAA CCGGCGCGGC 
CGGATCGTCA GGCGCTACGT CGGCGCGCCG GATTTTGCCG AGCTCAACCG CCTGCTCGAG 
CGGCTGCTGA CCGAGAGCTG A
 
Protein sequence
MKPIRVVAIA ALVLGCAGAT AVVLARRDAA PVVDYTLLDG SRHRSDALRG QVVLVNFWAT 
SCTVCVKEMP ELMATYRRFR DRGFETLAVS MSYDPPAYVV NYARSRELPF PVAIDNTGEI 
ARRFGDVQLT PTTVVINRRG RIVRRYVGAP DFAELNRLLE RLLTES