| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4041 |
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| Symbol | |
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| ID | 6160548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4528621 |
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| End bp | 4529529 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641666821 |
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| Product | protein of unknown function zinc metallopeptidase putative |
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| Protein accession | YP_001793060 |
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| Protein GI | 171060711 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2321] Predicted metalloprotease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000000000295256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAATGGG ACGGCCAGCG CGAAAGCGAC CAGATCGAGG ACCGCCGCGC TGACACCGGC
GGTGGCCCTG CCGGCCGGGG CGGCATCCGC CTGCCGGTCG GGCGTGGCGG GCGCGGCATC
GGCCTGGGCA CCGTGGCGGT GGCGCTGCTG GCGGGCTGGA TCTTCGGCAT CAACCCGCTG
ACCGTGCTCG GCCTGCTGGG CGGCGGCGGG CCGATCGAGG CGCCGGTCTC GCAGAGCGCA
CCGCACACGC CACGCGCCGC GCCGCAGGAC GAGAGCGCCC GCTTCGTCGC CACCGTGCTG
GCCTCGACCG AAGACGTCTG GGGCGAGCAG TTCCAGGCCA AGGGCACGAC CTACCGCAAG
CCGGTGCTGG TGCTGTTCCG TGGCACCACC CACACCGAAT GCGGCCGCGG CGAAGCGGCG
ATGGGGCCGT TCTACTGCCC GGCCGACCAG AAGGTCTACC TCGACCTCGA CTTCTTCGAC
GTGATGCGCC AGCGCCTGGG CGCGCCCGGC GATTTCGCCC AGGCCTACGT GGTGGCGCAC
GAGGTCGGCC ACCACGTGCA GCGCCTGAGC GGCGTTACCG AGAAGGTCGA GCAGGCCCGA
CGCCGGCTCG GCGAGGCGCA GGCGAATGCG CTGTCGGTGC GGGTCGAGCT GCAGGCCGAC
TGCTACGCCG GGCTGTGGGC GCACCACGCC GAGCAGGCCA GGCGCTGGCT CGACGCCGGC
GACATCGACG AGGCGCTGCA CGCGGCCGCG CAGATCGGCG ACGACACGCT GCAGCGCAAC
GCCGGCGGCG CGGTCGCGCC CGAGAGCTTC ACGCACGGCA GCAGCGAGCA GCGGGTGCGC
TGGTTCAGGC GCGGCTTCGA CAGCGGCAAG GTGGCCGACT GCAACACGCT CGACGCCCGC
AGGATCTGA
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| Protein sequence | MKWDGQRESD QIEDRRADTG GGPAGRGGIR LPVGRGGRGI GLGTVAVALL AGWIFGINPL
TVLGLLGGGG PIEAPVSQSA PHTPRAAPQD ESARFVATVL ASTEDVWGEQ FQAKGTTYRK
PVLVLFRGTT HTECGRGEAA MGPFYCPADQ KVYLDLDFFD VMRQRLGAPG DFAQAYVVAH
EVGHHVQRLS GVTEKVEQAR RRLGEAQANA LSVRVELQAD CYAGLWAHHA EQARRWLDAG
DIDEALHAAA QIGDDTLQRN AGGAVAPESF THGSSEQRVR WFRRGFDSGK VADCNTLDAR
RI
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