| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4021 |
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| Symbol | |
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| ID | 6163049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4504287 |
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| End bp | 4505021 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641666801 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001793040 |
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| Protein GI | 171060691 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00000248641 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGATCCAGA TCCAGAACAT CTCCAAGTGG TACGGCAGCT TCCAGGTGCT GACCGACTGC
ACCACCTCGA TCCAGAAGGG CGAGGTCGTG GTGGTCTGCG GCCCGTCGGG CTCGGGCAAG
AGCACGCTGA TCAAGACCGT CAACGCGCTC GAACCGATCC AGAAAGGCGA CATCGTCGTC
AACGGCACCA GCATCACCGA CCCCAAGACC GACCTGCCCA AGCTGCGCAG CCACGTCGGC
ATGGTGTTCC AGCACTTCGA GCTGTTCCCG CACCTGTCGG TGACCGAGAA CCTGACGATC
GCGCAGGTCA AGGTGCTCGG GCGCAGCCAG GACGACGCCA TCGCGCGCGG CCTGAAGATG
CTCGACCGCG TCGGGCTGAG CGCACACAAG GATAAGTTCC CCGGCCAGCT CTCGGGCGGC
CAGCAGCAGC GCGTGGCGAT CGCGCGCGCG CTGAGCATGG ACCCGATCGT GATGCTGTTC
GACGAGCCGA CCTCGGCGCT CGACCCCGAG ATGGTGGGCG AAGTGCTCGA CGTGATGGTC
AAGCTGGCGC AGGAAGGCAT GACGATGATG GTGGTCACGC ACGAGATGGG CTTTGCCAAG
AAGGTCAGCC ACCGGGTGAT CTTCATGGAC GCGGGCAAGA TCGTCGAGGA CTGCAGGAAG
GACGAGTTCT TCGGCAATCC GGAGGCGAGG TCGCCGCGGG CGAAGGACTT CTTGTCGAAG
ATCCTGAGTC ATTGA
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| Protein sequence | MIQIQNISKW YGSFQVLTDC TTSIQKGEVV VVCGPSGSGK STLIKTVNAL EPIQKGDIVV
NGTSITDPKT DLPKLRSHVG MVFQHFELFP HLSVTENLTI AQVKVLGRSQ DDAIARGLKM
LDRVGLSAHK DKFPGQLSGG QQQRVAIARA LSMDPIVMLF DEPTSALDPE MVGEVLDVMV
KLAQEGMTMM VVTHEMGFAK KVSHRVIFMD AGKIVEDCRK DEFFGNPEAR SPRAKDFLSK
ILSH
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