| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4017 |
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| Symbol | |
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| ID | 6163045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4499902 |
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| End bp | 4501257 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666797 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_001793036 |
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| Protein GI | 171060687 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00000999569 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACACCGG GCTCGCCCCA GGGTGACGCC CCGCCGGCGG GCCACGACGA CGCGACAGCC
GCACGCGCCG CATCCCGCCG GGCGGCAGAC AAGCAGCGCC AGGGGCTCGC CTGGTACCTG
GTGCAGCGGC CGGTCTTCCT CGGTGGCAAC GAGGCGACGC TGATGCGCGG CGGCACCGAG
CTGTTTCCGG CCATGCTGCG GGCGATCCGC GGTGCGCGGC GCGAGATCTG GCTCGCCTCC
TACATCTTCA ACAACGACGC GCTCGCCTTC GAGGTTGCCG ATGCGCTGGC CCAGGCCGCG
CAGCGCGGCA TCAAGGTGCG GGTGGTGGTG GACGGCTTCG GCTCCAAGCA CTGCCGCCGT
GAACTCGAGC AGCGCCTGAA GGCCGGCGGG CTGGCGCTGG CGGTGTTTCG CCCGATCGAG
CGCTGGACCC ACTGGCTGCA GCCCGGCCAG CTGCGCCGCC TGCACATGAA GCTGTGCACG
GTCGACGGCG AGATCGCTTT CATCGGCGGC ATCAACCTGA TCGACGACCA CGTCGACCTG
CGCCACGGAC GCACCGACGC GCCGCGGCTC GATTACGCCG TGCAGCTGCG CGGCCCGCTG
GTGACGGCGG TGGAGCAGGT AGCGCGGGCA ATGTGGTCAC GCGCCTGGTA CGGCCGTGAC
TGGCGCCAGG AGCTGCGCGT GCTGCTGTCG GCGCGCCAGC CGCTGCACGA GCTGCGCCGG
CTGCTGCGCC AGCTGCGCAT GCCGCGCCGC GCCGCGCCCG ACGAACCCGC GCTGACGCCG
GTGGCCGCCG CGCTGGTGGT GCGCGACAAC CTGCGCCAGC GCCGCACCAT CGAACGCGCC
CACATCGAGG CGATGCGCCG GGCGCGCGAG CGCATCTGGC TGGTCACGCC CTATTTCTAT
CCGGGCGCCG ACTTCCGTCG TGCACTGCGC GACGCGGCCG AGCGGGGTGT CCAGGTGCGG
CTGCTGCTGC AGGGCAAGGT CGACTACCGG CTGGCCGCGC TGGCCGCCCG CGTGCTGTAC
CAGGAGCTGA TGCAGCACGG CGTGCAGATC CACGAGTACA CGCCGGCCTT CCTGCACGCC
AAGGTGATGC TGGTCGACCG GCAGTGGTGC ACCGTCGGCA GCTCCAACAT CGACCCGCTG
TCGCTGCTGC TGAACCTGGA GGCCAACCTG GTGGTGCAGG ACGAGGGCTT CAACCGCGAA
CTGGCGGCCG ACCTCGAACA GGCCTTCGCG TCCAGCCGCG AGGTGCAGCA CGCCGAGCTG
CGCGAACTCG GCTGGGTGCG CCTGAGCCGG CGCGCGATCG TGGCCTGGTG CGCCTACATC
TACCTGCGCG TGGCCGGAGT CACCGGCAGG TACTGA
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| Protein sequence | MTPGSPQGDA PPAGHDDATA ARAASRRAAD KQRQGLAWYL VQRPVFLGGN EATLMRGGTE
LFPAMLRAIR GARREIWLAS YIFNNDALAF EVADALAQAA QRGIKVRVVV DGFGSKHCRR
ELEQRLKAGG LALAVFRPIE RWTHWLQPGQ LRRLHMKLCT VDGEIAFIGG INLIDDHVDL
RHGRTDAPRL DYAVQLRGPL VTAVEQVARA MWSRAWYGRD WRQELRVLLS ARQPLHELRR
LLRQLRMPRR AAPDEPALTP VAAALVVRDN LRQRRTIERA HIEAMRRARE RIWLVTPYFY
PGADFRRALR DAAERGVQVR LLLQGKVDYR LAALAARVLY QELMQHGVQI HEYTPAFLHA
KVMLVDRQWC TVGSSNIDPL SLLLNLEANL VVQDEGFNRE LAADLEQAFA SSREVQHAEL
RELGWVRLSR RAIVAWCAYI YLRVAGVTGR Y
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