| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4014 |
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| Symbol | |
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| ID | 6163425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4497629 |
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| End bp | 4498549 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641666794 |
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| Product | UbiA prenyltransferase |
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| Protein accession | YP_001793033 |
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| Protein GI | 171060684 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00000693045 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACTTCA CACTTGCAAG ACGTTGGGTG GCAGCGACCC GGCCCGGTTT TCTGGTCGTC
ACGCTGCTGG GCGTGCTGCT CGGCAGCGCG GTGGGGATGG CCTGCGGCGG CCCGGGCGAC
TGGATCGGCG GCGCGGCCGC GCTGCTGCTG GCGCTGCTGA CGCACGCCGC GATCAACCTG
CACAACGACT GGGGCGACGC CCAGATCGGC TCGGACGCCA TCAACACCGG CCGCATCGGG
CCGTTCTCGG GCGGCTCGCG GGTGGTGCAG GACGGCATCT TCAGCGTCGA ACAGCTGCGC
GACGCGGTCC AGATGCTGGG CGTGATCGTG ATCGGCGGCG GCATCCTGCT GACCGCGCGG
GTCGGCCCGG GCCTGCTGCC GATCGGCCTG GCCGGGCTGG TGATCGGTTA CGCCTACTCC
CACCCGCGGC TGGCGCTGAT GTCGCGCGGC GTGGGTGACG TGGCGGTGGC GCTGAGCTGG
TGGCTGGTGG TGCTGGGCGC CGACTACGTG CAGCGCCGCC AGTTCGACGT CATGCCGGCG
ATCGCCGGCG TCAGCCTGGC CTTGATGGTG GCCGGCATCC TGTGGGTGGC CGAGTTCCCC
GATGCCGCCG CCGACGCGCA GGCCGGCAAG CGCACGCTGG TGGTCCGCCT CGGGCCGCTG
CCCTCGGCCT GGGTCTATCT GCTGCTCGTG GTGGTGGCGC ATGCCTGGGT GGCGTGGTGG
TGGGCGATCG AGTGGCTGCC GACGTCGGCC TGGTGGGCGC TCGGCTCGGC GCCGCTGAGT
GCCGCCGCCG CGGCGAGCCT GCTGCGCCAC GCCCGCCAGC CGCAGCGCCT GCGGCCGACC
CTGGTGCTGA CGCTCGCCGC CACCGTGCTG CACGGCATGC TGCTGATCGC CGCCTACGTC
GCCGTCGTGC GGCTGCGCTG A
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| Protein sequence | MDFTLARRWV AATRPGFLVV TLLGVLLGSA VGMACGGPGD WIGGAAALLL ALLTHAAINL
HNDWGDAQIG SDAINTGRIG PFSGGSRVVQ DGIFSVEQLR DAVQMLGVIV IGGGILLTAR
VGPGLLPIGL AGLVIGYAYS HPRLALMSRG VGDVAVALSW WLVVLGADYV QRRQFDVMPA
IAGVSLALMV AGILWVAEFP DAAADAQAGK RTLVVRLGPL PSAWVYLLLV VVAHAWVAWW
WAIEWLPTSA WWALGSAPLS AAAAASLLRH ARQPQRLRPT LVLTLAATVL HGMLLIAAYV
AVVRLR
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