| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4013 |
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| Symbol | |
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| ID | 6163424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4495669 |
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| End bp | 4497465 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641666793 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_001793032 |
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| Protein GI | 171060683 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00000444023 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCAGCA GCTATGCCGG CCAGGTCAGC GAAAAGCTGA TGGGCCAGAC CGTCACCCTG
ATGGGTTGGG CCCACCGTCG CCGTGACCAC GGCGGTGTCA TCTTCATCGA CCTGCGCGAC
CGCGAAGGCC TGGTGCAGAT CGTCTGCGAC CCCGACCGGG CCGAGATGTT CAAGACCGCC
GAAGGCGTGC GCAACGAGTT CTGCCTGAAG ATCGTCGGCC TGGTGCGCGC GCGCCCGTCC
GGTACCGAAA ACGCCAACCT GGTGAGCGGC AAGGTCGAGG TGCTGTGCCA TGAACTCGAG
GTGCTGAACC CGAGCGTGAC GCCGCCGTTC CAGATCGACG ACGAGAACCT CAGCGAAACC
ACCCGCCTGA CGCACCGCGT GCTCGATCTG CGCCGCCCGC AGATGCAGAA GAACCTGATG
CTGCGCTACC GCGTGTCGAT GGAGGTGCGC AAGTTCCTCG ACGCCAACGG CTTCATCGAC
ATCGAGACGC CGATGCTGAC CAAGAGCACG CCCGAAGGTG CGCGTGACTA CCTGGTGCCC
AGCCGCGTCA ACGACGGCCA TTTCTTCGCG CTGCCGCAGT CGCCCCAGCT GTTCAAGCAG
CTGCTGATGG TGGCGGGTTT CGACCGCTAC TACCAGATCA CCAAGTGCTT CCGCGACGAA
GACCTGCGCG CCGATCGCCA GCCTGAATTC ACGCAGATCG ATATCGAGAC CTCGTTCCTG
AGCGAGGAAG AGATCCGCGG CATGTTCGAG GGCATGATCC GCACCGTCTT CCGCAACACC
ATCGGCGTCG ACCTGCCCGG CTACCCGGTC ATGACCTACG CCGACGCGAT GCACAAGTAC
GGCTCCGACA AGCCCGACCT GCGCGTCAAG CTGCAGTTCA CCGAGCTGAC CGACGTCATG
CGCGACGTCG ACTTCAAGGT CTTCTCCGCG CCCGCGCAGA GCAAGAACGG CCGCGTCGTC
GCCCTGCGCG TGCCGGGCGG CGCCGACATG AGCCGCGGCG AGATCGACGG CTACACCGAG
TTCGTCAAGA TCTACGGCGC CAAGGGCCTG GCCTGGATCA AGGTCAACGA CGTCGCCAAG
GGCCGCGAGG GCATGCAGTC GCCGATCGTC AAGAACCTGC ACGACGCGGC CATCGCCGAG
ATCATCGCCC GCACCGGCGT GTGCAACGGC GACCTGATCT TCTTCGGCGC CGACAAGGCC
AAGGTGGTCA ATGACGCCAT CGGCGCGCTG CGCGTGAAGG TCGGCCACAG CGACTTCGGC
AAGAAGAACG GCCTGTTCGA GGACAAGTGG GCGCCGCTGT GGGTGGTCGA CTTCCCGATG
TTCGAACACG ACGACGAAGG CGACCGCTGG AACGCCGTGC ACCACCCGTT CACGGCACCG
AAGGACGGCC ATGAAGACTA CATGGACACA GACCCGGGCA AGTGCATCGC CAAGGCCTAC
GACATGGTGC TCAACGGCTG GGAACTCGGC GGCGGTTCGG TCCGTATCCA CAAGGCCGAG
GTGCAGAGCA AGGTGTTCTC GGCGCTGAAG ATCGGCAAGG AAGACGCGCA GGTCAAGTTC
GGCTTCCTGC TCGACGCGCT GCAGTACGGC GCGCCGCCGC ACGGTGGCCT GGCCTTCGGC
CTGGACCGGA TCGTCACGAT GATGACCCGC GCCGAGTCGA TCCGCGACGT GATCGCCTTC
CCGAAGACCC AGCGCGCCCA GTGCCTGCTG ACCGGCGCGC CCAGCCTGGT CGACGAGAAG
CAGCTGCGCG AGCTGCACAT CCGGCTGCGC AACGCCGGGG CGGCCGGCAA CGCCTGA
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| Protein sequence | MRSSYAGQVS EKLMGQTVTL MGWAHRRRDH GGVIFIDLRD REGLVQIVCD PDRAEMFKTA
EGVRNEFCLK IVGLVRARPS GTENANLVSG KVEVLCHELE VLNPSVTPPF QIDDENLSET
TRLTHRVLDL RRPQMQKNLM LRYRVSMEVR KFLDANGFID IETPMLTKST PEGARDYLVP
SRVNDGHFFA LPQSPQLFKQ LLMVAGFDRY YQITKCFRDE DLRADRQPEF TQIDIETSFL
SEEEIRGMFE GMIRTVFRNT IGVDLPGYPV MTYADAMHKY GSDKPDLRVK LQFTELTDVM
RDVDFKVFSA PAQSKNGRVV ALRVPGGADM SRGEIDGYTE FVKIYGAKGL AWIKVNDVAK
GREGMQSPIV KNLHDAAIAE IIARTGVCNG DLIFFGADKA KVVNDAIGAL RVKVGHSDFG
KKNGLFEDKW APLWVVDFPM FEHDDEGDRW NAVHHPFTAP KDGHEDYMDT DPGKCIAKAY
DMVLNGWELG GGSVRIHKAE VQSKVFSALK IGKEDAQVKF GFLLDALQYG APPHGGLAFG
LDRIVTMMTR AESIRDVIAF PKTQRAQCLL TGAPSLVDEK QLRELHIRLR NAGAAGNA
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