| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3996 |
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| Symbol | rplB |
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| ID | 6160825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4479169 |
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| End bp | 4479993 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641666774 |
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| Product | 50S ribosomal protein L2 |
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| Protein accession | YP_001793015 |
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| Protein GI | 171060666 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0090] Ribosomal protein L2 |
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| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00000189322 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGTCG TCAAGGTCAA ACCGACTTCG CCAGGCCGTC GTGGCGTGGT GAAGATCGTG
CACAAGCACC TGCACAAGGG CAAGCCCGAA GCGTCGCTGC TCGAGCCCCA GATGCAGAAC
GCTGGCCGTA ACAACAACGG TCACATCACC GTTCGCCACA AGGGCGGCGG TCACAAGCAT
CACTACCGCG TGGTGGACTT CCGTCGCAAC AAGGACGGCA TCCCCGCGAA GGTCGAGCGC
ATCGAATACG ACCCCAACCG CACGGCGCAC ATCGCGCTGA TCTGCTACGC GGATGGCGAG
CGTTCGTACA TCATTGCGCC GCGTGGCCTG GAAGCGGGTC AGACGGTCCT GAACGGCGCC
GAAGCGCCGA TCAAGGCCGG CAACACGCTG CCGATCCGCA ACATCCCCGT GGGCTCGACC
ATCCATTGCG TCGAGATGAT GCCCGGCAAG GGTGCGCAGA TCGCGCGTTC GGCTGGCACC
TCGGTGACGC TGATGGCCCG TGAAGGCATC TACGCCCAGG TTCGCCTGCG CTCGGGTGAG
GTTCGCAAGA TCCACATCGA CTGCCGTGCC ACCATCGGTG AAGTCTCCAA CGAAGAGCAC
AACCTGCGCC AGTACGGCAA GGCCGGTGCG AAGCGTTGGC TGGGTATCCG CCCGACCGTT
CGCGGCGTGG CGATGAACCC GGTGGACCAC CCGCACGGCG GCGGCGAAGG CCGCACCGGC
GAAGGTCAGG CGCCGGTGTC TCCGTGGAAC ACCCTCACCA AGGGCTACCG CACCCGCAAC
AACAAGCGCA CGCAGACGTT CATCGTCTCG CGTCGCAAGA AGTAA
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| Protein sequence | MAVVKVKPTS PGRRGVVKIV HKHLHKGKPE ASLLEPQMQN AGRNNNGHIT VRHKGGGHKH
HYRVVDFRRN KDGIPAKVER IEYDPNRTAH IALICYADGE RSYIIAPRGL EAGQTVLNGA
EAPIKAGNTL PIRNIPVGST IHCVEMMPGK GAQIARSAGT SVTLMAREGI YAQVRLRSGE
VRKIHIDCRA TIGEVSNEEH NLRQYGKAGA KRWLGIRPTV RGVAMNPVDH PHGGGEGRTG
EGQAPVSPWN TLTKGYRTRN NKRTQTFIVS RRKK
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