| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3993 |
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| Symbol | rpsC |
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| ID | 6159698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4477657 |
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| End bp | 4478514 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641666771 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_001793012 |
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| Protein GI | 171060663 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0000371657 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGACAGA AAATCCACCC TACCGGGTTC CGCCTGCCGG TCACGCGCAA CTGGTCGTCA
CGCTGGTATG CGAACAACCG CAACTTCGCC GGCATGCTGG CCGAAGACAT CGAAGTCCGT
GAGTTCCTGA AGAAGAAGCT CAAGAACGCC GCTGTCTCGC GCGTCACCAT CGAGCGTCCC
GCCAAGAACG CCCGCATCAC GATCTACTCG GCACGTCCGG GCGTGGTGAT CGGCAAGAAG
GGCGAGGACA TCGAGAACCT GAAGCTCGAA CTGGCCAAGA TGCTGAAGGT GCCCGTCGCC
GTCAACATCG AGGAAGTGCG CAAGCCCGAG GTCGATGCGC AGCTGATCGC CGAATCGATC
ACCCAGCAGC TCGAAAAGCG CATCATGTTC CGCCGCGCCA TGAAGCGCGC GATGCAGAAC
GCGATGCGCC TGGGCGCGCA GGGCATCAAG ATCATGTCGG CCGGTCGTCT GAACGGCATC
GAAATCGCTC GCACCGAGTG GTATCGCGAA GGCCGCGTGC CTCTGCATAC CCTGCGTGCG
GACATCGACT ACGGCACCGC CGAAGCGAAG ACCACCTACG GCGTCATCGG CGTCAAGGTG
TGGGTCTATC GTGGCGATCG CCTGGCCAAC GGCGATGCGC CGGTGATGCG TGGTGAAGAT
CGTCCGGAAG ACGATCGTCG CCGCCGCAAC CCGCGTGGCG ACCGTCCGGG TGACCGTCGT
GGTCCGGGTG CTGGTCGTGG CGGCCCGGGT GCCGGTCGCG GCCCGGCTGA TGGCGCATCG
GCTGCACCGT CTGGTGATGC CAAGCCTGGC GTGAAGCGCG TCGTGCGCGC TGCACCCCCG
GCGGCAAAAG GAGAATAA
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| Protein sequence | MGQKIHPTGF RLPVTRNWSS RWYANNRNFA GMLAEDIEVR EFLKKKLKNA AVSRVTIERP
AKNARITIYS ARPGVVIGKK GEDIENLKLE LAKMLKVPVA VNIEEVRKPE VDAQLIAESI
TQQLEKRIMF RRAMKRAMQN AMRLGAQGIK IMSAGRLNGI EIARTEWYRE GRVPLHTLRA
DIDYGTAEAK TTYGVIGVKV WVYRGDRLAN GDAPVMRGED RPEDDRRRRN PRGDRPGDRR
GPGAGRGGPG AGRGPADGAS AAPSGDAKPG VKRVVRAAPP AAKGE
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