| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3988 |
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| Symbol | |
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| ID | 6159693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4474679 |
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| End bp | 4476004 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666766 |
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| Product | Zinc finger-domain-containing protein |
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| Protein accession | YP_001793007 |
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| Protein GI | 171060658 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02098] MJ0042 family finger-like domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.000146664 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCTGG CGACCTCCTG CCCATCGTGC GGCACGATCT TCAAGGTCGT CGAAGACCAG
CTCAAGGTCT CCGAAGGCTG GGTGCGCTGC GGCCACTGCC ACGAGGTCTT CAACGCGCTC
GAGGGCCTGT TCGACCTGGC CGGCCGCCAG CGGCCGCAGT TTTCGCCACG CCCGGCAGCC
GGCGCCGACA CGATGCCACG CCGCAGCGGC ACGGTCCCGG CACCGGGCCC GGCAACCCCA
CCGCCCAGAG CCGATCAGCG GCACCCCGAC AACCCGGCCG ACTGGATCGA AACGCGGCCG
GCGATGTTCT CAGACGTCGA AGCCCTGCGC GCGCAGCAAC TGGAACGCGA TGCGCGGCGA
CTCAGTCGGC TGGCCGCACA GGACGCGGCG ACCACGGCCA CCGGGGCGAC CGCACCACCG
GATGACGCGC CACCCGAGGT CTCGACGCCG TCACAGCCCG GGCCGCTGGC GGTGCCGGAG
ACGGATCAGG CCGAGTTATC GTCCCGATCG GAGACGGCCC GTGCCGGCCC GGCGATCGAG
TTCGCCGCCG CCGACGAACC CGACCGGATC GAGGCCGAGG CTCGGCAGAC CGAATGGCCG
GCCGGTTCAG AAACCGAGTT CATCGATCTC AGCGCGGCAG ACACCGTCTT TCAGCCGCAC
GAACAGAACA GCCTTTTCGG CGACAACCTG ACCGCCTACG ACGCCCTGCC GCCCGTCGCC
GACGAGGCCG AGGCCGGTAA TCGGTCCGCG GCCGCACCTG CGGTCGACGC GGCGGCTGCG
GCCCTGGCAG CCGATGCGGC ATCCGGCACG GCGGCGTTGC CAGCCTTCGT GCGTCAGGCC
GATCGCGCCG CCTGGTGGCG CAAGCCGACG GTTCGCCTGC TGCTGGCGGC GGGCTGTGCC
TGTGCATCGG CCACCTTGCT GCTGCAACTC GCGCTGCACC ATCGCGACAG CCTGGCCGGG
CGCTGGCCTG CGCTGCACCC GCCGCTGACC GCGATCTGCG CGCAGATCGG CTGCACCGTG
CAGGCGCCTC GGCAGCTCGA CGCCCTGGTG GTCGAGAACA CGGCGCTGAC CCGACCGGCG
GGTGTCGACG GCTACCGCCT GCAGGTGCTG CTGCGCAACC GGGTCGATTT CGAGATCCGT
GCGCCGCACC TCGAACTCAG CCTGACCGAC GCCGCCGGTG CCGTGATCGT GCGTCGCGTG
CTGAGCCCCG CCGACTTCAG GCAGGCCGAG ACCTTGGGCG CCAGCGCCGA AGGCAACTGG
CAGCTCGAAC TCAGCAGCAG AGACAAGCGC ATCGCCGGCT ACACCGTCGC CGCGTTCTAT
CCCTGA
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| Protein sequence | MSLATSCPSC GTIFKVVEDQ LKVSEGWVRC GHCHEVFNAL EGLFDLAGRQ RPQFSPRPAA
GADTMPRRSG TVPAPGPATP PPRADQRHPD NPADWIETRP AMFSDVEALR AQQLERDARR
LSRLAAQDAA TTATGATAPP DDAPPEVSTP SQPGPLAVPE TDQAELSSRS ETARAGPAIE
FAAADEPDRI EAEARQTEWP AGSETEFIDL SAADTVFQPH EQNSLFGDNL TAYDALPPVA
DEAEAGNRSA AAPAVDAAAA ALAADAASGT AALPAFVRQA DRAAWWRKPT VRLLLAAGCA
CASATLLLQL ALHHRDSLAG RWPALHPPLT AICAQIGCTV QAPRQLDALV VENTALTRPA
GVDGYRLQVL LRNRVDFEIR APHLELSLTD AAGAVIVRRV LSPADFRQAE TLGASAEGNW
QLELSSRDKR IAGYTVAAFY P
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