| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3987 |
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| Symbol | prmA |
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| ID | 6159692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4473752 |
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| End bp | 4474657 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666765 |
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| Product | ribosomal protein L11 methyltransferase |
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| Protein accession | YP_001793006 |
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| Protein GI | 171060657 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2264] Ribosomal protein L11 methylase |
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| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.000114299 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTTGAAC TGATGCTGCT GGCCCCGGCC GGCGAAGTGG AGCGCATTTC CGATGCGCTG
ATGGAACTCG ACGCGCTGGC GGTGACGGTG GAAGACGCCG ATGCCGACAC GCCCGACGAG
GCGCCGATCT TCGGCGAGCC CGGCATGCCC GCCACCTTCG GCGAGCAGAT CCGCGGCTGG
CGGCATTCGG TGCTGAAGGC CCTGTTCGAG AACGAGACCC TGGCCACCGA GGCGGCCACC
GTGCTGCTGG CCGAAGAAGG CTGGAGCGAC CTGCACGTGC AGGGGCTCGC GCCGGTGGCC
GAGCAGGACT GGGTGCGGCT GACGCAGTCG CAGTTCGATC CGGTGCGCAT CACCGACACC
TTCTGGATCG TGCCCTCGTG GCACGAACCG CCGGCGCAGG CCCGGCGCGT GATGCGGCTC
GATCCCGGCC TGGCCTTCGG CACCGGTACC CATCCGACCA CCCGCATGTG CCTGCGCTGG
ATCGCCGGCC ATGCCGATGT GGCGACGCCG TGGCCGCGCG TGCTCGACTA CGGCTGCGGC
TCGGGCATCC TCGCCATCGG CGCGGCGCTG CATGGCGCGA CGGGCATCGA TGCGGTCGAC
ATCGACACCG CCGCGGTCGA GTCGACCCTG GCCAACGCCC AGGCCAACGG CGTGACGCTG
CACGCCGGCC TGCCCGATCA GGCCAACGGC AGCTATCCGG TCGTGCTGGC CAACATCCTG
TCGGCGCCGT TGAAGCTGCT GGCGCCGCTG TTGTGCGGCC ATGTCGAGGC GGGCGGATCG
CTGGTGCTGG CCGGCATCCT GGAGCGCCAG ATCGACGAGC TGACCGAGGC CTACGCGCCG
TGGATCGCCC TCGAGGTCGG CGACCGCGAA GACGGCTGGG TTCTGCTGAC GGGCCGCCGC
GCCTGA
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| Protein sequence | MVELMLLAPA GEVERISDAL MELDALAVTV EDADADTPDE APIFGEPGMP ATFGEQIRGW
RHSVLKALFE NETLATEAAT VLLAEEGWSD LHVQGLAPVA EQDWVRLTQS QFDPVRITDT
FWIVPSWHEP PAQARRVMRL DPGLAFGTGT HPTTRMCLRW IAGHADVATP WPRVLDYGCG
SGILAIGAAL HGATGIDAVD IDTAAVESTL ANAQANGVTL HAGLPDQANG SYPVVLANIL
SAPLKLLAPL LCGHVEAGGS LVLAGILERQ IDELTEAYAP WIALEVGDRE DGWVLLTGRR
A
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