Gene Lcho_3985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3985 
Symbol 
ID6161507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp4471907 
End bp4472362 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content65% 
IMG OID641666763 
Productacetyl-CoA carboxylase, biotin carboxyl carrier protein 
Protein accessionYP_001793004 
Protein GI171060655 
COG category[I] Lipid transport and metabolism 
COG ID[COG0511] Biotin carboxyl carrier protein 
TIGRFAM ID[TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0000892172 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACCTTC GCAAGCTCAA GACCCTGATC GACCTGGTTT CGGAATCGAA CATTTCCGAG 
CTGGAGATCA CTGAAGCCGA CGGCAAGGTC CGGATCGTCA AGACCGCACC GGTGGCCGCC 
GTGGCAGCGC CGGTCTATGC CGCAGCGCCC GTGGCCGCTC CGGTGGCGGC CGTGGCCGCG 
GCCCCGGTGG TCGCAGCCGT GGCCGAAGCG CCAGCCTTCA CCGGCCATGT CGTGAAGTCG 
CCGATGGTGG GCACCTTCTA CCGCGCCTCC AACCCCGGCG CCAAGCCGCT GGTGGATGTC 
GGCCAGCAGG TCAAGGAAGG CCAGGCGGTC TGCATCATCG AAGCCATGAA GATCATGAAC 
GAGATCGACA GCGACAAGGC CGGCACGATC AGCAAGGTGC TGGTCGAGAA CGGCCAGGCG 
GTCGAGTACG GCCAGCCGCT GTTCATCATC GAATGA
 
Protein sequence
MDLRKLKTLI DLVSESNISE LEITEADGKV RIVKTAPVAA VAAPVYAAAP VAAPVAAVAA 
APVVAAVAEA PAFTGHVVKS PMVGTFYRAS NPGAKPLVDV GQQVKEGQAV CIIEAMKIMN 
EIDSDKAGTI SKVLVENGQA VEYGQPLFII E