| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3984 |
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| Symbol | |
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| ID | 6161506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4470954 |
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| End bp | 4471541 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641666762 |
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| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
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| Protein accession | YP_001793003 |
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| Protein GI | 171060654 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0000964008 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCGTC GCAAGCTCAC CCTCGGCGTC GTCGCCGGCA CCGCCCTGGC CGCGGGGATC
GGCTGGTCGC TGCGCCGCGG TGCCGGCACG CCGCCGGCCA CCCCCGACAC CGCCAACCCG
AGCGCAGCCC GGGCCCCGGC CGGCGCCGAT GCGGCATCGG CCGGCGCCGC ACCCGATCTG
TGGAGCCTGC GCTTCGATCG CCCCGAGGGC GGCGAGGTGG TGATGGCGAG CCTGCGCGGC
AAGCCCCTGC TGATCAACTT CTGGGCCACC TGGTGCCCGC CCTGCGTGCG CGAGATGCCG
CTGCTCGACA GCCATGCACG CGAGTTCGGC CCACGCGGCC TTCAGGTGCT GGGCCTGGCG
GTGGACGGGC CGTCGCCGGT GCGCGAGTTC CTGCTCAAGA CGCCGGTCAG CTTTCCGATC
GGCTTGACCG GTTTTGCCGG CACCGAGCTG GCGCGCTCGC TCGGCAACAC GACCGGCGGT
CTGCCGTTCA CGGTGCTGTT CGACAGCGCC GGCACCGCCG TGCAACAGAA GCTGGGCGAG
ACCCATCTGG CCGAGCTGCA GGGCTGGGCC AAGTCGGTCG GGCTCTGA
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| Protein sequence | MNRRKLTLGV VAGTALAAGI GWSLRRGAGT PPATPDTANP SAARAPAGAD AASAGAAPDL
WSLRFDRPEG GEVVMASLRG KPLLINFWAT WCPPCVREMP LLDSHAREFG PRGLQVLGLA
VDGPSPVREF LLKTPVSFPI GLTGFAGTEL ARSLGNTTGG LPFTVLFDSA GTAVQQKLGE
THLAELQGWA KSVGL
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