| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3981 |
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| Symbol | |
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| ID | 6161503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4468567 |
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| End bp | 4469457 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666759 |
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| Product | TonB family protein |
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| Protein accession | YP_001793000 |
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| Protein GI | 171060651 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000313556 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAACGCGA AATCCGTCCT GCAACGCCTG CGGCAACTGT CGACCCTGCA GGTGGCGCTG
CTGGTCAGCC TGGCCGTGCA CGCGGCCTTG CTGACGGTGC GCTTCGTCGA CCCCGAAGGT
TTGCGGCGCA TCCTCGAAGA CACGCCGCTG GAGGTGGTGC TGGTCAATTC CAGCAGCGCC
ACCGCGCCGC CCAACGCGCA GGTCATCGCC CAGCGCAACC TGGCCGGCGG CGGCGATGCG
GCACAGGGCC GGGCGACCTC GCCGCTGCCG CCGATGCCGA CCACCCAGGC CGGCGATTCG
TTCGAGGACA CCCGCCAGCA GATCGCGCAG CTGCAGGCGC AGCAGATGCT GCTGCTGGCG
CAGGTCAAGC GCGAGCTGGC CAGCCTGTCC ACGCCCGAGC AGCGCCAGAG CGGCAACCCG
ACGCTGCGTC CGGCCGAGGA GCAGCGCCGC CGCCAGCTGC TGGCCCTGCT GGCGCAGATC
GAGAAACGCA TCCAGCAGGA AAACGCCCGG CCGCGCCGGC GCTTCGTCAG CCCGGCCGCG
CGCGAGGGCG TGCACGCGCT CTATTACGAC AGCCTGCGCC AGCGCGTCGA GGACGTCGGC
ACCCGCAACT TCCCGGAGGT CAACGGCCGC AAGCTCTACG GCGAACTGAC GATGCTGGTG
GCAGTGGGCG GCAGCGGCGA GGTGGTCGAG GCCGACATCG TGCAGTCGTC AGGCAACAAG
GTGCTCGACA AGCGCGCCCT GACGATCGTG CGCGGCGCCG CGCCCTACGG CAACTTCACG
CCGGCGATGC TGGCGCAGTT CGACCAGCTG GTGTTCGTCT CGCGCTTCCG CTTCACGCGC
GACGAGGGCC TGAAGGCGGC CGTCGAGGAC GCCACCGGCG CGCGACCCTG A
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| Protein sequence | MNAKSVLQRL RQLSTLQVAL LVSLAVHAAL LTVRFVDPEG LRRILEDTPL EVVLVNSSSA
TAPPNAQVIA QRNLAGGGDA AQGRATSPLP PMPTTQAGDS FEDTRQQIAQ LQAQQMLLLA
QVKRELASLS TPEQRQSGNP TLRPAEEQRR RQLLALLAQI EKRIQQENAR PRRRFVSPAA
REGVHALYYD SLRQRVEDVG TRNFPEVNGR KLYGELTMLV AVGGSGEVVE ADIVQSSGNK
VLDKRALTIV RGAAPYGNFT PAMLAQFDQL VFVSRFRFTR DEGLKAAVED ATGARP
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