| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3964 |
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| Symbol | |
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| ID | 6162389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4442204 |
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| End bp | 4445311 |
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| Gene Length | 3108 bp |
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| Protein Length | 1035 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666742 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001792983 |
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| Protein GI | 171060634 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000156628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACGTTT CCGCCTGGTC GATCCGCAAC CCGCTGCCGG CGGTGCTGCT GTTCGTGCTG
CTGACGCTCG GCGGCATGGC GAGCTTCCAC GCCATGAAGA TCCAGCAGTT CCCGGATCTG
GAACTGCCCA CCGTCAGCAT CGTCGCCAGC CTGCCCGGCG CGTCGCCGTC GCAGCTCGAG
ACCGAGGTGG CGCGCAAGAT CGAGAACGCG CTGGCCACGC TGCAGGGCTT GAAGCACATC
TACACCAAGC TGCAGGACGG CACGGCCACC ATCACGGCCG AGTTCCGGCT CGAGAAGCCG
ACGCAGGAGG CGGTCGACGA GGTGCGCGAT GCCGTCAACC GGGTGCGCTC CGACCTGCCC
GGCGAGCTGC GCGAACCCAC CGTCAGCAAG CTCAACCTGG CCGGCGCGCC GGTGCTGACC
TACACGGTGG CGACGTCGCG GCTCGATGAA GAGGGCCTGT CCTGGTTCGT CGACAACACC
ATCACCAAGG CGCTGCTGAG CGTCAACGGC GTGGGCGCGG TGGCGCGGGT GGGCGGGGTC
ACGCGCGAGG TGCGGGTCGA GCTCGATCCG GCACGGCTGC TGGCGCTGGG CGCCACCGCC
GCCGACGTGT CGCGCCAGTT GCGCGCGGTG CAGCAGGACG CCGCGTCCGG CCGCGCCGAC
CTGGGCGGCG CCGAGCAGGC GCTGCGCACG CTCGCCAGCG TGGCGTCGGC CGACGAGCTG
GCGCGGCTGG AGATCGCGCT GGCCGACGGC CGCCACGTGC GCCTGGACCA GATCGCCACG
GTGCTCGACA CCGTCACCGA GCCGCGCAGC GCGGCGCTGC TCAACGGCAA ACCGGTGGTC
GGTTTCGAGA TCAGCCGCAG CCGCGGCGCC AGCGAGGTCG AGGTGGCGCA GGGCGTGCAG
CGCGTGCTCG ATCAGCTGCG GCTGGCGCAC CCGGACCTGC AGTTCGAGCA GGCCTTCAAC
CTGGTCGACC CGGTGATCGA GAACTACGAC GGCTCGCTGG CGCTGCTGTA CGAGGGCGCG
ATCCTGGCCG TGATCGTGGT CTGGTTCTTC CTGCGCGACT GGCGCGCCAC GCTGGTGGCT
GCGACCGCGC TGCCGCTGTC GGTGATCCCG GCCTTCATCG GCATGTGGGC GCTCGGGTTC
AGCGTCAACG TGGTGACGCT GCTGAGTCTG TCGCTGGTGG TGGGCATCCT GGTCGACGAC
GCGATCGTCG AGATCGAGAA CATCGTGCGC CACCTGAAGA TGGGCAAGAG CCCGTACCAG
GCGGCGATGG AGGCGGCCGA CGAGATCGGC CTGGCGGTGA TCGCCACCAC CTTCACGCTG
ATCGCGGTGT TTTTGCCGAC CGCCTTCATG GCCGGCATCC CGGGCAAGTT CTTCAAGCAG
TTCGGCTGGA CCGCGTCGCT GGCGGTGTTC GCCTCGCTGG TGGTGGCGCG GGCGCTGACG
CCGATGATGG CGGCCTACCT GCTCAAGCCG ATCGTCGTCA GCGGCGAAGA GCGCGACGGC
CGCGTGATGA GCACCTATCT GCGCATGGCA GCCTGGTCGG TGCGGCACCG CATCGTCACC
GTGCTGGGCG CGGCGGCGTT TTTTGTCGGC TCGCTGATGC TGATCCCGCT GCTGCCGACC
GGCTTCATCC CGCCCGACGA CTTCGGCCAG AGCCAGGTCA CGGTCGAGCT GCCACCCGGC
AGCACGCTGC ACGACACCTA TGCCGCGGCC GAGCAGGCGC GTGCGATCGT CGGCGCGCAC
CCGCACGTCA CGCGCATCTA CACCGCCATC GGCGGCGGTG CGACCGGCAG CGATCCGTTT
GCCGGTGGCG GCGCGGCCGA AGTGCGCAAG GCCAGCCTGA CGCTCAACCT GACCGCCCGC
GAAGACCGTC CCGGCGTGCG CAAGCAGGCC ATCGAGATGG AGCTGCGCGA GGCCATGAAA
CAGCTGCCCG GCGCACGCGT GACGGTCGGC CTGGGCGGCT CGGGCGAGAA GTACGTGCTG
GTGCTGTCGG GCGACGACGG CGCCACCCTG CTGCAGGCCG CGCGCGCGGT CGAACAGGAC
CTGCGCCGCG TTCCCGGCCT GGGCAACATC AGCTCGACCG CCAGCCTGGT GCGCCCGGAG
CTGGTGCTGC GGCCGGACGT GGCGCGCGCC GCCGAGGCCG GCGTCACCAC CGGGCGAATA
GCCGACACGC TGCGCATCGC CACCAGCGGC GACTTCGACG CCAGCCTGCC CAAGCTCAAC
CTGAGCCAGC GCCAGGTGCC GATCGTGGTG CGCCTGCCCG AGTCGGCGCG GCAGGACCTG
GCGCTGCTGC AGCAGCTCAC CGTGCCGGGC AAGGGCGGCC AGCCGATCGC GCTGTCACAG
GTCGCGAGCT TCGGCATGGA AAGCGCGCCG GCCCAGATCG ACCGCTACGA CCGCCAGCGC
AACATCAACT TCGAGGTCGA GCTCAACGGC CGTCCGCTCG GCGACGTGGC GGCCGAGGTG
GCTGCCCTGC CGAGCCTGCA GCAGCTGCCG GCCGGTGTCA GCCAGGCCAC GCTCGGTGAC
GCCGAGGTGA TGGCCGAGCT GTTCGCCAGC TTCGGCCTGG CGATGCTGAC CGGCGTGCTG
TGCATCTACC TGGTGCTGGT GCTGCTGTTC AAGGGCGTGA TGCAGCCGGT GACGATCCTG
GCCGCGCTGC CGCTGAGCCT GGGTGGCGCG TTCGTCGCGC TGCTGGCGAC CAACAGCGCG
TTTTCGATGC CGTCGCTGAT CGGCCTGATC ATGCTGATGG GCATCGCCAC CAAGAACTCG
ATCCTGCTGG TCGACTACGC CATCCTGGCG CGCCGCGCCG GCATGCCGCG CCGCGAGGCC
CTGCTCGACG CCTGCCACAA GCGCGCTCGA CCGATCGTCA TGACGACCAT CGCGATGGGC
GCGGGCATGT TGCCGATCGC GCTCGGCTGG GGCACCGATC CGAGCTTTCG TGCGCCGATG
GCGATCGCGG TGATCGGCGG GCTGATCACC TCCACGGTGC TGAGCCTGCT GGTGATTCCG
GTGGTCTACA CCTATGTCGA CGACGCGGTG CAGTTCGGCC TGCGCCTGCT GCGCCGCGTG
CGTGGCGTGG CGCCGGGGCA GGCGGTCATC GAGCCGCCGC CCCCTTGA
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| Protein sequence | MNVSAWSIRN PLPAVLLFVL LTLGGMASFH AMKIQQFPDL ELPTVSIVAS LPGASPSQLE
TEVARKIENA LATLQGLKHI YTKLQDGTAT ITAEFRLEKP TQEAVDEVRD AVNRVRSDLP
GELREPTVSK LNLAGAPVLT YTVATSRLDE EGLSWFVDNT ITKALLSVNG VGAVARVGGV
TREVRVELDP ARLLALGATA ADVSRQLRAV QQDAASGRAD LGGAEQALRT LASVASADEL
ARLEIALADG RHVRLDQIAT VLDTVTEPRS AALLNGKPVV GFEISRSRGA SEVEVAQGVQ
RVLDQLRLAH PDLQFEQAFN LVDPVIENYD GSLALLYEGA ILAVIVVWFF LRDWRATLVA
ATALPLSVIP AFIGMWALGF SVNVVTLLSL SLVVGILVDD AIVEIENIVR HLKMGKSPYQ
AAMEAADEIG LAVIATTFTL IAVFLPTAFM AGIPGKFFKQ FGWTASLAVF ASLVVARALT
PMMAAYLLKP IVVSGEERDG RVMSTYLRMA AWSVRHRIVT VLGAAAFFVG SLMLIPLLPT
GFIPPDDFGQ SQVTVELPPG STLHDTYAAA EQARAIVGAH PHVTRIYTAI GGGATGSDPF
AGGGAAEVRK ASLTLNLTAR EDRPGVRKQA IEMELREAMK QLPGARVTVG LGGSGEKYVL
VLSGDDGATL LQAARAVEQD LRRVPGLGNI SSTASLVRPE LVLRPDVARA AEAGVTTGRI
ADTLRIATSG DFDASLPKLN LSQRQVPIVV RLPESARQDL ALLQQLTVPG KGGQPIALSQ
VASFGMESAP AQIDRYDRQR NINFEVELNG RPLGDVAAEV AALPSLQQLP AGVSQATLGD
AEVMAELFAS FGLAMLTGVL CIYLVLVLLF KGVMQPVTIL AALPLSLGGA FVALLATNSA
FSMPSLIGLI MLMGIATKNS ILLVDYAILA RRAGMPRREA LLDACHKRAR PIVMTTIAMG
AGMLPIALGW GTDPSFRAPM AIAVIGGLIT STVLSLLVIP VVYTYVDDAV QFGLRLLRRV
RGVAPGQAVI EPPPP
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