| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3960 |
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| Symbol | |
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| ID | 6162385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4439120 |
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| End bp | 4439629 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666738 |
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| Product | phosphoribosyltransferase |
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| Protein accession | YP_001792979 |
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| Protein GI | 171060630 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000308236 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCTGA GCCTGGACGC TGAAGCGCTG TACCTGCAGC TGCGAAACGG CGTGCGCCAA
CTGCTGGCCG CCGAGGGCAT GGCCGACGCC GTGCTGGTGG GCGTGTGGTC GGGCGGCGCC
TGGCTGGCCG AGCGGCTGCA ACGCGACCTC GGCCTGGCGA CGCCGCACGG CGTGATCTCC
AGCCTGCTGC ACCGCGACGA TTTCGGCGCG CGCGGCCTGG CCTCGGGCAC CGACCCGACG
CACCTGCCGT TTTCGGTCGA CGGCCGGCCG ATCCTGCTGA TCGACGACGT GCTGCACACC
GGCCGCACGA TCCGCGCCGT GATCAACGAG CTGTTCGATT TCGGCCGCCC GTCCAGCGTC
ACGCTGGCGG TGCTGGTCGA CCGCGGCGGG CGCCAGCTGC CGATCGAGGC GGCCTATGCC
GCCGCCCGCA TCGTCCTGCC GCCGCTCCAG AAGCTCGCGC TCGCGCGTGG CGAGGGCGGG
CGGTTCCAGT TTTCAGTCAA GGAAAGTTGA
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| Protein sequence | MSLSLDAEAL YLQLRNGVRQ LLAAEGMADA VLVGVWSGGA WLAERLQRDL GLATPHGVIS
SLLHRDDFGA RGLASGTDPT HLPFSVDGRP ILLIDDVLHT GRTIRAVINE LFDFGRPSSV
TLAVLVDRGG RQLPIEAAYA AARIVLPPLQ KLALARGEGG RFQFSVKES
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