Gene Lcho_3956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3956 
Symbol 
ID6162572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4435573 
End bp4435908 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content71% 
IMG OID641666734 
Producthypothetical protein 
Protein accessionYP_001792975 
Protein GI171060626 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00333987 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCTACA AGTTCAAGTC CAAGGCTGCC GGCGACGTCA TCATGACCGC GCCGATCGGG 
GATCGCATCC TGCGCCTGCT CGACCGCGAG CCTGCGGCCC AGGGCATCTT CGAGGTCGAG
GCGATGCCCG GCGCGATCGC CGCGCTCGAG GCCGCGATCG TCGCCGATGA AGCCCTGCGC
CGCGCCGCCG AAGCAGAAGC CGCCGCCGAC CCGGAGCCCA GAAGCCCGCC CCCGCCCGGC
CGCGACAACG TCAGCCTGCG CCAGCGCGCC TGGCCGCTGA TCGAGATGAT GAAACGCTGC
CACGCCGAGG ACGCGCCGAT CGTCTGGGGC GTCTGA
 
Protein sequence
MLYKFKSKAA GDVIMTAPIG DRILRLLDRE PAAQGIFEVE AMPGAIAALE AAIVADEALR 
RAAEAEAAAD PEPRSPPPPG RDNVSLRQRA WPLIEMMKRC HAEDAPIVWG V