Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3956 |
Symbol | |
ID | 6162572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 4435573 |
End bp | 4435908 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641666734 |
Product | hypothetical protein |
Protein accession | YP_001792975 |
Protein GI | 171060626 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00333987 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTCTACA AGTTCAAGTC CAAGGCTGCC GGCGACGTCA TCATGACCGC GCCGATCGGG GATCGCATCC TGCGCCTGCT CGACCGCGAG CCTGCGGCCC AGGGCATCTT CGAGGTCGAG GCGATGCCCG GCGCGATCGC CGCGCTCGAG GCCGCGATCG TCGCCGATGA AGCCCTGCGC CGCGCCGCCG AAGCAGAAGC CGCCGCCGAC CCGGAGCCCA GAAGCCCGCC CCCGCCCGGC CGCGACAACG TCAGCCTGCG CCAGCGCGCC TGGCCGCTGA TCGAGATGAT GAAACGCTGC CACGCCGAGG ACGCGCCGAT CGTCTGGGGC GTCTGA
|
Protein sequence | MLYKFKSKAA GDVIMTAPIG DRILRLLDRE PAAQGIFEVE AMPGAIAALE AAIVADEALR RAAEAEAAAD PEPRSPPPPG RDNVSLRQRA WPLIEMMKRC HAEDAPIVWG V
|
| |