Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3955 |
Symbol | |
ID | 6162571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 4434837 |
End bp | 4435559 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641666733 |
Product | phosphoglycerate mutase |
Protein accession | YP_001792974 |
Protein GI | 171060625 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0406] Fructose-2,6-bisphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0124021 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTACA GCGACGTGAC CCGCGTGCTG GCGATCCGGC ACGGCGAGAC CGCCTGGAAC CGCGACGCGC GCATCCAGGG CCAGATCGAC ATCCCGCTCA ACGACGCCGG CCTGGCCCAG GCCCGCAGCC TGGCGCAGGC GCTGGCCGAG GACGCGCTGG CGGCGGTCTA CAGCTCCGAC CTGCTGCGTG CGCACCAGAC CGCCGAGGCG GTGGCGGCCG CGCAGGGCCT GGTCGTGCAG GCCGACGTGG GTCTGCGCGA GCGCCATTTC GGCGATTTCG AAGGCCGCAC CTACCACGAG ATCGACGCCG ACCTGCCCGA GCTGGCACAA CGCTGGCGCC GCCGCGACCC GGATTTCGGC CCGCCCGGCG GCGAGGTGCT GAAGGCCTTC TTTGCGCGCA GCGTCAGCGC GATCGAACGC ATCGCCGCGT CGCACCGCGG CCAGACGATT GCCGTGGTCT GCCACGGCGG CGTGCTCGAT TGCCTCTATC GCGCCGCCAC CCGCCTGAGC CTGAACGCGC CGCGCACCTG GACGGTGGCC AACGCCAGCA TCAACCGCCT GCTGTTCACC GACGACGGCT GCACGCTGGT CGGCTGGGGC GACACCCAGC ACCTCGACGG CAGCGACCAC GCGCCGCTGG ACAGCCGCTC CGCGCATGCA GGCCACACGG CGATCGCCGC GGCGCCCCCG CTCGACGAAG GCAGCGACGG CGGCGCGGCC TGA
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Protein sequence | MPYSDVTRVL AIRHGETAWN RDARIQGQID IPLNDAGLAQ ARSLAQALAE DALAAVYSSD LLRAHQTAEA VAAAQGLVVQ ADVGLRERHF GDFEGRTYHE IDADLPELAQ RWRRRDPDFG PPGGEVLKAF FARSVSAIER IAASHRGQTI AVVCHGGVLD CLYRAATRLS LNAPRTWTVA NASINRLLFT DDGCTLVGWG DTQHLDGSDH APLDSRSAHA GHTAIAAAPP LDEGSDGGAA
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