| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3951 |
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| Symbol | |
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| ID | 6162937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4430271 |
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| End bp | 4432148 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666729 |
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| Product | histidine kinase |
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| Protein accession | YP_001792970 |
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| Protein GI | 171060621 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.283359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTGC GCGCGCTCGC ACAAGCCTTG CATCCGGCGC GCTGGGGCCT GCTGCTGGTG
GCCCTGGGCA TCGTCGTGCT GTGGGGTTTC GAGGTGGCCG GCTCCGGCAC CACACGCGGC
AGCGTGCTGC TGCGCGAGGC CCAGGTGGCA CGCGGGGTGG CGGGCAACGG CACCGAGTTG
CCTGCCAACA CCAGCCGCAT CGTGCTGCCC GACGTCTGGG AACGCAGCCA GCGCCCGGAC
ACCCACGCCT GGTACCGCAT CGAGTTCGAC CGCCCCGCCA GCGCCCCGGA CACCCTGATG
GCGGCCTACC TCGAGCAGGT CTGCGCCAGC TACGAGGTGC GCCTGAACGG CCAGCTGATC
GACATGCGCG GCAGCCTGGT CGCACCCCGG CCGAGCGACT GCTACGAGCC CGCGCTGATG
GTGCTGCCGC CCACGCTGCT CAAGCCGAGC GGCAATCGGC TGGATGTGCG CGTCGCCGGG
CTGGCCTTGC CGCAGGTCGC GGCGCGCGAG CGGGCAGCGC AGCTGTCGGC GGTGCGCATC
GGCGCGTTCA CCGATCTCGA GCCGCTCCAT CGGCACACGC GCAACTACAA CCTCGGCGCC
GCGCATGCGC TGGCCACGGT AGCCGGCGTG ATCGGCCTGG CGGCGCTGGC GCTCAAGGCG
CTGAGCCAGC TGCCCTACTT CGGCTACTTC GGCGCCGCCA GCCTGGGCTG GGCGGTGCTG
TGCGGCCTGC TCACCGGCGC CGCGCTGCCG GTGCCGGCGC TCTGGACCGA GCTGCTGATC
TGCACCCTCG CGCCACCCGT CGGCGTGGCT GGCATCCTGT TCCTGATGCG CTATTGCGGC
CTGCGCGTGG TCTGGCTCGA AGTGGCGTTG GCGCTGCAGT GCCTGATGGT GCCGGCCAGT
CTGGCGCTGG CGGCGCCCGA GCGCGTGCAC AGCGTCGCGC TGCCGTGGGT GATCATCCTG
ACGCTCGAAC TGGCGGCCAC GCTGGCGGTG TTCCTGCGCC GCGCCTGGCG GTTCTCGCGG
CCCGACTTCT GGATCGGCGC GGCCGCGACG CTGGCCTTCG TGCTGACGCT CGCCGGCGAG
TGGCTGCTGC GCCCCGGCGT GCTGCTGCTG CCGGGCAAGC ACGCCATCAG CGTGGCGGTG
ATCGTGATGT TCGCCGGCAT GGTGTGGCGC ATGCACCAGC TCTTCCAGGG CGCCATCGCG
GCGGCCGAGC AGGGCCGCAT CCAGGCCGAG CGGCGGGTCA TCGACATCAC CGCCGACATG
GAACAGAACT ACGGCCAGAT GGCCGAGCTG CGGGTCGAGC AGGTCACCAC CCGCGAGCGC
AAGCGCATCG CCGCCGACCT GCACGACGAC CTCGGCGCCA AGCTGCTGAC GATCGTGCAC
ACCAGCGAGA ACGACCGCAT CGCCACCCTG GCGCGCGAGG CGCTCGAGGA AATGCGGCTG
TCGGTGCGCG GCCTGACCGG CCGGGCGATG CAGGTCGGCG ACGCCATCGG CGACTGGCGC
AGCGAAGTCA TGAGCCGGCT CTCGCAGGGC GGCGTCGAGC TGACCTGGAA CACCCCCGAC
GAGCTGCTGA TGAGCGAACG CGCGATGAGC GCACGCGCCT ACGTGCAGAC CACCCGCATC
CTGCGCGAGG CGGTCAGCAA CGTGCTCAAG CACAGCGGCG CGAGCCGCTG CGAGGTCTCG
ATCCGGCAGG ACCACAGCGA CTTCGAACTC ACCATCTCCG ACAACGGCAA GGGCATCCCG
ATCGCGCTGG ACGGCAAGCT CGATCGCGGC CACGGCATGT CGACGATGAA GGGCCGCGCC
AAGCAGCTGC AGGGCCAGTG CCTGGTGGAG TCAGGCCCCG GTTACGGCAC GACGATCCGG
CTGACCTTGC CGCTGTGA
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| Protein sequence | MRVRALAQAL HPARWGLLLV ALGIVVLWGF EVAGSGTTRG SVLLREAQVA RGVAGNGTEL
PANTSRIVLP DVWERSQRPD THAWYRIEFD RPASAPDTLM AAYLEQVCAS YEVRLNGQLI
DMRGSLVAPR PSDCYEPALM VLPPTLLKPS GNRLDVRVAG LALPQVAARE RAAQLSAVRI
GAFTDLEPLH RHTRNYNLGA AHALATVAGV IGLAALALKA LSQLPYFGYF GAASLGWAVL
CGLLTGAALP VPALWTELLI CTLAPPVGVA GILFLMRYCG LRVVWLEVAL ALQCLMVPAS
LALAAPERVH SVALPWVIIL TLELAATLAV FLRRAWRFSR PDFWIGAAAT LAFVLTLAGE
WLLRPGVLLL PGKHAISVAV IVMFAGMVWR MHQLFQGAIA AAEQGRIQAE RRVIDITADM
EQNYGQMAEL RVEQVTTRER KRIAADLHDD LGAKLLTIVH TSENDRIATL AREALEEMRL
SVRGLTGRAM QVGDAIGDWR SEVMSRLSQG GVELTWNTPD ELLMSERAMS ARAYVQTTRI
LREAVSNVLK HSGASRCEVS IRQDHSDFEL TISDNGKGIP IALDGKLDRG HGMSTMKGRA
KQLQGQCLVE SGPGYGTTIR LTLPL
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