Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3950 |
Symbol | |
ID | 6162936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 4429003 |
End bp | 4430127 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641666728 |
Product | PhoH family protein |
Protein accession | YP_001792969 |
Protein GI | 171060620 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.493956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGGTTT TTGATTCTCG TGGACGGCCT CATCTGCCGG CGCGGCGCGA CAATGACGTT TCCGGGCCCA GCCCGAAAGA TCACACGCTT GCCTTGATCC TGCGCCACGC CTTCATCCCC CCCGACAACC GCCGGCTCGC CCACGTCTGT GGCGCCCTGG ACGAAAACCT CCGCACCATC GAGGCCGCGT TCGACGTGGC GATCCGGCGG CGCAACGAGT CGTTCCGGAT CGAGGGCGCC AAACGCGGCG CCGAGCGTGC GGTGGCGCTG CTGCAGCAGC TCTACGACCG CGCCACCCAG CCGATCGAGC CGGCCCGCCT GCAGCTCGAC CTGGTGCAGG CGATGCAGGA CGACTCGCCC CAGGCCGCTC ACAACGGCCG TCGCAACGGT CTTGGCGATG CCGTCGTGGC GCTCGACGCC GTTCCGCCGG CCGACGAGAT CGTGCTGCGC ACGCGACGCA GCGACCTGAG CGGGCGCACC GTCAACCAGG TCGAATACCT GCGCCACATG CTCGGCCACG ACATCACCTT CGGCATCGGC CCGGCCGGCA CCGGCAAGAC CTTCCTGGCG GTGGCCTGTG CGGTCGATGC GCTCGAACGC AACACCGTGC AGCGCATCAT CCTGACCCGC CCGGCGGTCG AGGCCGGCGA GCGCCTCGGT TTCCTGCCCG GGGACCTGTC GCAGAAGGTC GACCCCTACC TGCGCCCGCT CTACGACGCG CTCTACGACC TGATGGGCCC GGACCGGGTC GGCAGGGCGT TCGAGAAGGG CCAGATCGAG ATCGCGCCGC TGGCATTCAT GCGCGGGCGC ACGCTCAACC ATGCGTTCGT GATCCTCGAC GAGGCGCAGA ACACCACGCC CGAGCAGATG AAGATGTTCC TCACCCGCAT CGGCTTCGGC AGCCGTGCGG TGGTGACCGG CGACACCAGC CAGATCGACC TGCCCAAGGG CCAGAAGAGC GGGCTGGTCG ACGCCTGCCA GGTGCTCGCC CAGGTGCGCG GCATCGCCAC CACCCGCTTC ACCTCGATCG ACGTGGTGCG CCACCCGCTG GTGGCGCGCA TCGTCGAGGC CTACGAGGCC GACCCGAGCC GCGGCCGGCG TGATGTCGAC GCCGATGTCT TCTGA
|
Protein sequence | MRVFDSRGRP HLPARRDNDV SGPSPKDHTL ALILRHAFIP PDNRRLAHVC GALDENLRTI EAAFDVAIRR RNESFRIEGA KRGAERAVAL LQQLYDRATQ PIEPARLQLD LVQAMQDDSP QAAHNGRRNG LGDAVVALDA VPPADEIVLR TRRSDLSGRT VNQVEYLRHM LGHDITFGIG PAGTGKTFLA VACAVDALER NTVQRIILTR PAVEAGERLG FLPGDLSQKV DPYLRPLYDA LYDLMGPDRV GRAFEKGQIE IAPLAFMRGR TLNHAFVILD EAQNTTPEQM KMFLTRIGFG SRAVVTGDTS QIDLPKGQKS GLVDACQVLA QVRGIATTRF TSIDVVRHPL VARIVEAYEA DPSRGRRDVD ADVF
|
| |