Gene Lcho_3950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3950 
Symbol 
ID6162936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4429003 
End bp4430127 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content70% 
IMG OID641666728 
ProductPhoH family protein 
Protein accessionYP_001792969 
Protein GI171060620 
COG category[T] Signal transduction mechanisms 
COG ID[COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.493956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTTT TTGATTCTCG TGGACGGCCT CATCTGCCGG CGCGGCGCGA CAATGACGTT 
TCCGGGCCCA GCCCGAAAGA TCACACGCTT GCCTTGATCC TGCGCCACGC CTTCATCCCC
CCCGACAACC GCCGGCTCGC CCACGTCTGT GGCGCCCTGG ACGAAAACCT CCGCACCATC
GAGGCCGCGT TCGACGTGGC GATCCGGCGG CGCAACGAGT CGTTCCGGAT CGAGGGCGCC
AAACGCGGCG CCGAGCGTGC GGTGGCGCTG CTGCAGCAGC TCTACGACCG CGCCACCCAG
CCGATCGAGC CGGCCCGCCT GCAGCTCGAC CTGGTGCAGG CGATGCAGGA CGACTCGCCC
CAGGCCGCTC ACAACGGCCG TCGCAACGGT CTTGGCGATG CCGTCGTGGC GCTCGACGCC
GTTCCGCCGG CCGACGAGAT CGTGCTGCGC ACGCGACGCA GCGACCTGAG CGGGCGCACC
GTCAACCAGG TCGAATACCT GCGCCACATG CTCGGCCACG ACATCACCTT CGGCATCGGC
CCGGCCGGCA CCGGCAAGAC CTTCCTGGCG GTGGCCTGTG CGGTCGATGC GCTCGAACGC
AACACCGTGC AGCGCATCAT CCTGACCCGC CCGGCGGTCG AGGCCGGCGA GCGCCTCGGT
TTCCTGCCCG GGGACCTGTC GCAGAAGGTC GACCCCTACC TGCGCCCGCT CTACGACGCG
CTCTACGACC TGATGGGCCC GGACCGGGTC GGCAGGGCGT TCGAGAAGGG CCAGATCGAG
ATCGCGCCGC TGGCATTCAT GCGCGGGCGC ACGCTCAACC ATGCGTTCGT GATCCTCGAC
GAGGCGCAGA ACACCACGCC CGAGCAGATG AAGATGTTCC TCACCCGCAT CGGCTTCGGC
AGCCGTGCGG TGGTGACCGG CGACACCAGC CAGATCGACC TGCCCAAGGG CCAGAAGAGC
GGGCTGGTCG ACGCCTGCCA GGTGCTCGCC CAGGTGCGCG GCATCGCCAC CACCCGCTTC
ACCTCGATCG ACGTGGTGCG CCACCCGCTG GTGGCGCGCA TCGTCGAGGC CTACGAGGCC
GACCCGAGCC GCGGCCGGCG TGATGTCGAC GCCGATGTCT TCTGA
 
Protein sequence
MRVFDSRGRP HLPARRDNDV SGPSPKDHTL ALILRHAFIP PDNRRLAHVC GALDENLRTI 
EAAFDVAIRR RNESFRIEGA KRGAERAVAL LQQLYDRATQ PIEPARLQLD LVQAMQDDSP
QAAHNGRRNG LGDAVVALDA VPPADEIVLR TRRSDLSGRT VNQVEYLRHM LGHDITFGIG
PAGTGKTFLA VACAVDALER NTVQRIILTR PAVEAGERLG FLPGDLSQKV DPYLRPLYDA
LYDLMGPDRV GRAFEKGQIE IAPLAFMRGR TLNHAFVILD EAQNTTPEQM KMFLTRIGFG
SRAVVTGDTS QIDLPKGQKS GLVDACQVLA QVRGIATTRF TSIDVVRHPL VARIVEAYEA
DPSRGRRDVD ADVF