| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3947 |
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| Symbol | |
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| ID | 6162933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4425458 |
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| End bp | 4426423 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666725 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001792966 |
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| Protein GI | 171060617 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTCC GCACCCTCGA TCTGAACCTG CTGCGGGTCT TCGACACCGT GATGGCCGAG
CGCAACCTGA CGCGCGCCGC CGAGCAGCTG GCCATGACGC AGCCCGCCGT CAGCAACGCG
CTGCGCCGCC TGCGAGAGAG CGTGGGCGAG GCGCTCTTCA CCCGCAGCGC CTTCGGCGTC
AGGCCGACCG CCCGTGCCGA AGCACTCTGG CCGACCGTGC AGTCGGCGCT GACCCAGTTG
CGCGACAGCC TCGACCCCAG CATCTACGAG CCCCGCAGCC AGCCGCACAC CTTCGCGCTG
GCGATGGCCG ACGCCACCGC GGCGCTGATC CTGCCGCGCC TGCTGGGACA GCTGCAGGCG
GAACACGCGC TGGCCAGCCT GCGGGTGCAG CCGCTGGCCA CGCGCGACCC CAGCCCGCTG
CTCGAACAGG GCGAGGCCGA TCTGGCGATC GGGCACTTTC CGGAAGTCGC GGCCCGGATG
TCCGGCCTGG GCGCACAGGC GCCGCTGCTG CACCAGTCGC TCTACCAGAC CGAATACGTC
TGCGTGATGC GGCGCGGCCA TCCGCTCGCC GAGGGCGAAC TGAGCCTCGA CGCCTACTGC
GCCGCCGACC ACCTGCTGGT GAGCTTCTCA GGCCGCGGAC AGGGGCTGAT CGACGAGGCG
CTGGCCAGCG TGCAGCGGCG CCGCAGGCTG GTGCTCACGG TCAACCAGTT CTTCACCGCC
GGTCGGGTGG TGGCGCAGAC CGATCTGCTG ACGGTGCTGC CCGATGCCTT CCTGTCGGTC
ACCGGCGCGC AGCAGGAGCT GGTCAGCCGC GCACTGCCGC TGCCGCTGGC CGCGCTGAAT
GTGCACATGC TCTGGCACCG GCGCCACGAC CGCCATCCGG CCCAGCGCTG GCTGCGCGAG
CAGATCACGC AAGCCGTCGG CGCCCCGCCT CGCAGCGCAA AACCTCAGTC CGCTGCCGAG
CCCTGA
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| Protein sequence | MNFRTLDLNL LRVFDTVMAE RNLTRAAEQL AMTQPAVSNA LRRLRESVGE ALFTRSAFGV
RPTARAEALW PTVQSALTQL RDSLDPSIYE PRSQPHTFAL AMADATAALI LPRLLGQLQA
EHALASLRVQ PLATRDPSPL LEQGEADLAI GHFPEVAARM SGLGAQAPLL HQSLYQTEYV
CVMRRGHPLA EGELSLDAYC AADHLLVSFS GRGQGLIDEA LASVQRRRRL VLTVNQFFTA
GRVVAQTDLL TVLPDAFLSV TGAQQELVSR ALPLPLAALN VHMLWHRRHD RHPAQRWLRE
QITQAVGAPP RSAKPQSAAE P
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