| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3945 |
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| Symbol | |
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| ID | 6162931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4423121 |
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| End bp | 4424995 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666723 |
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| Product | phosphoenolpyruvate carboxykinase |
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| Protein accession | YP_001792964 |
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| Protein GI | 171060615 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1274] Phosphoenolpyruvate carboxykinase (GTP) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCATC CCGCCATGGC CGGCGTGCAC GTGAACGCAC CGTCATTCGT CAAGAACGCC
AAGCTGATCG CCTGGGTTGC CGAGATCGCC GCGCTCACGC AGCCTGCAGC GATCCACTGG
TGCGATGGCA GCCAGGCCGA ATATGACCAG CTGTGCCAGC AACTGGTCGC CGCCGGCACC
TTCCGCAAGC TCGACGAGGC CAAGCGCCCG AACAGCTACC TCGCCTGGTC GGACCCGAGC
GACGTGGCGC GCGTCGAAGA CCGCACCTAC ATCTGCAGCG ACCGCAAGGA AGACGCCGGC
CCGACCAACA ACTGGATGGA ACCGGCGCAG ATGCGCAGCC TGCTGGAAAG CGGCGACGCC
GCGCTGTTCC GCGGCGCGAT GCGTGGCCGC ACGATGTACG TGGTGCCGTT CAGCATGGGC
CCGCTGGGCT CGCCGATCGC CCACATCGGC GTCGAACTCT CCGACAGCCC GTACGTGGCG
GTCAACATGC GCATCATGAC CCGCATGGGC CGCGCGGTTT ACGACGTGCT GGGTGTCGAC
GGCGACTTCG TGCCCTGCGT GCACACCGTG GGCGCACCGC TCGAAGCCGG CCAGAAGGAC
GTCACCTGGC CGTGCAACAA GACCAAGTAC ATCGTCCACT ACCCGAGCAC CCGCGAGATC
TGGTCCTACG GTTCGGGCTA CGGCGGCAAC GCGCTGTTGG GCAAGAAGTG TTTCGCACTG
CGCATCGCCT CGAACATGGG CCGCGACCAG GGCTGGCTGG CCGAGCACAT GCTGATCCTG
GGCGTGACCT CGCCCGAGGG CAAGAAGTCG CACGTCGCCG CCGCCTTCCC GAGCGCCTGC
GGCAAGACCA ACTTCGCGAT GCTGATCCCG CCGGCTGCCC TGGGCGACTG GAAGGTCACC
ACCATCGGCG ACGACATCGC CTGGATCAAG CCCAGCGCCG ACGGCAAGCT GCGCGCCATC
AACCCGGAAG CGGGCTACTT CGGCGTGGCC CCGGGCACCA ACTTCAAGAC CAACCCGAAC
TGCATGGCGT CGCTGAACCG CGACGTCATC TTCACCAACG TCGCGCTGAC CGACGACGGT
GACGTCTGGT GGGAAGGCAT GACCGACGAG CTGCCCAGCC ACCTGATCGA CTGGCAAGGC
AAGGACTGGA CGCCCGAAAC CGCCCGCGGC GCCGACGGCA AGCTGCGCCC GGCTGCGCAC
CCGAACGCCC GCTTCACGGT GGCCGCCACC AACAACCCGG CGCTCGACCC CGAGTGGGAC
AACCCGGCCG GCGTGGCGAT CGACGCCTTC ATCTTCGGCG GCCGTCGCTC GACCACCGTG
CCGCTGGTGA CCGAAGCGCG CAACTGGGTC GAAGGCGTCT ACATGGCCGC AACCATGGGC
TCGGAAACCA CCGCCGCCGC TGCCGGCCAG ATGGGCGTGG TGCGCCGCGA CCCGTTCGCC
ATGCTGCCGT TCACCGGCTA CAACATGAGC GACTACTTCC AGCACTGGCT GGATCTGGGC
GCGCGCCTCG AAGCCGCCGA AGCCAAGCTG CCGGCGATCT ATTGCGTCAA CTGGTTCCGC
AAGGGCGCCG ACGGCAAGTT CGTGTGGCCG GGTTACGGCG ACAACATGCG CGTGCTGCAG
TGGATGCTGG GCCGCATCGA GGGCGAGGCC GAGGGCGAAG AACACGTCTT CGGTGTCAGC
CCGCGCTACG ACGACCTGTC GTGGGACGGC ATGGAATTCA GCCAGGCCCA GTTCGAGAGC
GTCATCGGCA TCGACCACGC GGCCTGGCAG CAGGAGCTGG CGCTGCACGA ACAGCTGTTC
GAGCAACTCG CCCACAACCT GCCGGACGCG CTGCGCGCCA CCAAGGCCCA GATCGAAGTG
CGCCTGGCTC GCTGA
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| Protein sequence | MNHPAMAGVH VNAPSFVKNA KLIAWVAEIA ALTQPAAIHW CDGSQAEYDQ LCQQLVAAGT
FRKLDEAKRP NSYLAWSDPS DVARVEDRTY ICSDRKEDAG PTNNWMEPAQ MRSLLESGDA
ALFRGAMRGR TMYVVPFSMG PLGSPIAHIG VELSDSPYVA VNMRIMTRMG RAVYDVLGVD
GDFVPCVHTV GAPLEAGQKD VTWPCNKTKY IVHYPSTREI WSYGSGYGGN ALLGKKCFAL
RIASNMGRDQ GWLAEHMLIL GVTSPEGKKS HVAAAFPSAC GKTNFAMLIP PAALGDWKVT
TIGDDIAWIK PSADGKLRAI NPEAGYFGVA PGTNFKTNPN CMASLNRDVI FTNVALTDDG
DVWWEGMTDE LPSHLIDWQG KDWTPETARG ADGKLRPAAH PNARFTVAAT NNPALDPEWD
NPAGVAIDAF IFGGRRSTTV PLVTEARNWV EGVYMAATMG SETTAAAAGQ MGVVRRDPFA
MLPFTGYNMS DYFQHWLDLG ARLEAAEAKL PAIYCVNWFR KGADGKFVWP GYGDNMRVLQ
WMLGRIEGEA EGEEHVFGVS PRYDDLSWDG MEFSQAQFES VIGIDHAAWQ QELALHEQLF
EQLAHNLPDA LRATKAQIEV RLAR
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