| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3944 |
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| Symbol | |
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| ID | 6163589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4422139 |
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| End bp | 4422882 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666722 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_001792963 |
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| Protein GI | 171060614 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAC GCCTTTTCGT CGACACGCCC CTGCAGGCCG GGCTCGACCT GTCGCTGCCC
GCCGGCGCAG CGCGCCACGT CCAGGTCCTG CGGATGCAGC CCGGCGAAGA ACTGATCGTC
TTCAACGGTC AGGGCGGCGA GTGGCGGGTG CGCATCGCGC GCATGGGCCG CAGCGAGGTG
CAGGTGCTGG TGGAGCAGTT CGTCGACGTC GATCGCGAAC TGGCGCTGCA CGTCACGCTG
GTGGCCGGCA TGCCGGCCAA CGAACGCTTC GACTGGCTGA TCGAAAAGGC CACCGAACTC
GGCGCCGCCG AGATCGTGCC GACGATGTGC GAACGCTCGG TCCTGCGCCT GAGCGGCGAG
CGGGCGCAGA AGAAACGCGA GCACTGGCAA GGCATTGCCA TCTCGGCAGC CCAACAGTGC
GGCCGCACCC GCGTGCCCCA CATCGCCGCG GTGCGCAGCC TGTCCGAGGA GCGGGCCGGC
GAATCCGCCG ACACCCCGGT GACCCAGCTG CTGCTGAGCC TGGCCGACGC GCAGCCGCTC
GGCCGCCGCC TGGCCGCGCG CGCCGACACC GGTGCGCCGC TGCGGATCTA CAGCGGCCCC
GAAGGCGGAT TCACCGAAGC GGAAGAGCGG CTGCTGCGCC AAGGCGGCGC GCAGCCGACC
AGCCTGGGGC CGCGCGTGCT GCGCTCCGAA ACCGCACCGC TGGCCGTTCT CAGCCACCTC
GCGCTCGACA CGACGAAACG CTGA
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| Protein sequence | MSARLFVDTP LQAGLDLSLP AGAARHVQVL RMQPGEELIV FNGQGGEWRV RIARMGRSEV
QVLVEQFVDV DRELALHVTL VAGMPANERF DWLIEKATEL GAAEIVPTMC ERSVLRLSGE
RAQKKREHWQ GIAISAAQQC GRTRVPHIAA VRSLSEERAG ESADTPVTQL LLSLADAQPL
GRRLAARADT GAPLRIYSGP EGGFTEAEER LLRQGGAQPT SLGPRVLRSE TAPLAVLSHL
ALDTTKR
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