Gene Lcho_3943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3943 
Symbol 
ID6163588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4420559 
End bp4422073 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content73% 
IMG OID641666721 
ProductMg chelatase, subunit ChlI 
Protein accessionYP_001792962 
Protein GI171060613 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0606] Predicted ATPase with chaperone activity 
TIGRFAM ID[TIGR00368] Mg chelatase-related protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTTG CCGTCGTCCA CAGCCGTGCC CTGATCGGGC TCCAGGCACC CGATGTCACC 
GTCGAGGTGC ATCTCGCCAA TGGCCTGCCC AGCTTCACGC TGGTCGGACT GGCCGACACC
GAAGTCAAGG AGGCCCGCGA ACGGGTTCGC GCCGCGCTGC AGAACAGCGG CCTGGAGTTC
CCGCACAACA AGCGCATCAC CGTCAACCTG GCGCCGGCCG ATCTGCCCAA GGAGGGCGGA
CGCTTCGACC TGCCGATCGC GATCGGCATC CTCGCCGCCA GCGGGCAGGT CAGCAGCGCC
GGCCTCGACG GCCTGGAGTT CGCCGGCGAG CTCTCGCTCG CAGGCGACCT GCGGCCGGTG
CGCGGCGCGT TGGCGATGGC CCTGGCGTTG CAGCGCTCGC CGACCGCGCG CTGCCTGGTG
CTGCCGCAGT ACAGTGCCCG CGAGGCCGCC CGCGTGCAAG GATTGCGGCT GCGTTGCGCC
AGCCATCTGC TCGATGTCGT CGCGGCATTG CAGGACGGCG AACTCGCGCA ACCCTTGTCC
GAACCCAAGC CGTTCGAGAC CGGCGCGGCA CCGGCACTGC CGGATCTGCG TGACGTCAAA
GGCCAGGCCG GCGCCAAGCG GGCGCTGGAG CTGGCCGCGG CCGGATCGCA CAGCCTGCTG
TTCGTGGGGC CGCCGGGCAC CGGCAAGTCG ATGCTGGCGC AGCGCCTGGC CGGCCTGCTG
CCACCGCTCG ACGAGTCCGA GGCACTGGAG TCGGCCGCCA TCCTGAGCCT GGCCGGCCAG
TTCGACGCCC GCCTCTGGGC CACGCGCGTG ATGCGTTCGC CGCATCACAC GGCGTCGTCG
GTGGCGCTGG TCGGCGGCGG CTCGCCACCG CGGCCGGGCG AGATTTCGCT GGCGCACCAC
GGCGTGCTGT TCCTCGACGA GCTGCCCGAG TTCCCGCGAA CCGCCCTCGA GGCGCTGCGA
GAGCCACTCG AAAACGGCCG CATCACGATC TCGCGCGCGG CCCGCCAGGC CGAGTTTCCG
GCCCGATGCC AGCTGGTGGC AGCGATGAAT CCGTGCGCCT GCGGACAACT CGGCGCCAGC
ACCCGGGCCT GCCGCTGCTC GCCTGAACAG GTCCGGCGCT ACCAGGCCCG GCTGTCGGGG
CCGCTGCTCG ACCGCATCGA CCTGCGTGTC GAGGTGCTGG CGATCCCGCC GCAGGCGCTG
TCGGCGATTG CCGATGGCGA ACCCAGCGCC GTGATCGCCG AGCGGGTCGC ACACGCGCGT
GAACGCCAGA TGCGGCGCCA GGGCTGCGCC AACAGCGCCT TGCACGCCGC CCAGCTCGAC
GAGCAGATCC GCGCCCTGCC CGCCGCACGC GAGTTCCTGG ATGCCGCAGC GTCGCGCCTC
GGCTGGTCGG GCCGCAGCCT GCACCGGGTC TTGCGCGTGG CCCGCACGGC CGCCGACCTG
GCAGGCGCCG CCGACGTCCA GGTGGTGCAC GTGGCCGAGG CGATCCAGCT GCGGCGCGCC
CTGCCCGGCG TCTGA
 
Protein sequence
MSLAVVHSRA LIGLQAPDVT VEVHLANGLP SFTLVGLADT EVKEARERVR AALQNSGLEF 
PHNKRITVNL APADLPKEGG RFDLPIAIGI LAASGQVSSA GLDGLEFAGE LSLAGDLRPV
RGALAMALAL QRSPTARCLV LPQYSAREAA RVQGLRLRCA SHLLDVVAAL QDGELAQPLS
EPKPFETGAA PALPDLRDVK GQAGAKRALE LAAAGSHSLL FVGPPGTGKS MLAQRLAGLL
PPLDESEALE SAAILSLAGQ FDARLWATRV MRSPHHTASS VALVGGGSPP RPGEISLAHH
GVLFLDELPE FPRTALEALR EPLENGRITI SRAARQAEFP ARCQLVAAMN PCACGQLGAS
TRACRCSPEQ VRRYQARLSG PLLDRIDLRV EVLAIPPQAL SAIADGEPSA VIAERVAHAR
ERQMRRQGCA NSALHAAQLD EQIRALPAAR EFLDAAASRL GWSGRSLHRV LRVARTAADL
AGAADVQVVH VAEAIQLRRA LPGV