Gene Lcho_3928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3928 
SymbolinfA 
ID6161666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4411013 
End bp4411231 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content54% 
IMG OID641666706 
Producttranslation initiation factor IF-1 
Protein accessionYP_001792947 
Protein GI171060598 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00008] translation initiation factor IF-1 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAG ACGACGTCAT TCAGATGCAG GGCGAGGTCC TTGAAAACCT GCCCAACGCG 
ACATTTCGCG TCAAGTTGGA GAATGGGCAC GTAGTGCTCG GCCATATTTC CGGGAAGATG
CGCATGCACT ACATACGCAT CTTGCCGGGT GACAAAGTTA CCGTAGAGCT AACGCCCTAC
GATCTGTCCC GTGCTCGCAT CGTTTTCCGG GCGAAGTGA
 
Protein sequence
MSKDDVIQMQ GEVLENLPNA TFRVKLENGH VVLGHISGKM RMHYIRILPG DKVTVELTPY 
DLSRARIVFR AK