| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3926 |
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| Symbol | rpsM |
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| ID | 6161664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4410442 |
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| End bp | 4410807 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641666704 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_001792945 |
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| Protein GI | 171060596 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACGTA TTGCTGGTAT CAACATTCCG CCCCACAAAC ACGCCGAAAT CGGCCTGACG
TCGATCTATG GCGTTGGCCG TACGACGGCT CAGAAAATTT GTGAGGCCTG TGGCATCGCC
TACAACAAGA AGGTCAAGGA CCTGGATGAC AGCGACCTGG AGAAGATCCG GGAAGAAGTC
GGCCGCCTGA CCATCGAGGG CGATCTGCGC CGCGAAATCT CGATCAACAT CAAGCGATTG
ATGGATCTGG GTTGCTATCG CGGTTTCCGT CATCGCCGCG GTCTGCCGGT GCGTGGTCAA
CGCACTCGCA CCAACTCCCG CACCCGCAAG GGCCCCAAAA AGGGCGCGGC GGCGCTGAAG
AAGTAA
|
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| Protein sequence | MARIAGINIP PHKHAEIGLT SIYGVGRTTA QKICEACGIA YNKKVKDLDD SDLEKIREEV
GRLTIEGDLR REISINIKRL MDLGCYRGFR HRRGLPVRGQ RTRTNSRTRK GPKKGAAALK
K
|
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