| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3905 |
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| Symbol | |
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| ID | 6161792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4386589 |
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| End bp | 4390146 |
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| Gene Length | 3558 bp |
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| Protein Length | 1185 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666683 |
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| Product | indolepyruvate ferredoxin oxidoreductase |
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| Protein accession | YP_001792924 |
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| Protein GI | 171060575 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.399913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCC CCCTGCCCGA AGCCGTGCGA CGTGCGCTGG AAGCCGTCAC CCTCGACGAC
AAGTACACCC TCGGCCACGG GCGCGCCTTC ATGAGCGGCA TCCACGCGCT GGTGCGCCTG
CCGATGCTGC AGCAGCTGCG CGATGCGCGC GCCGGGCTCA ACACCGCCGG GTTCATCAGC
GGCTACCGCG GCAGCCCGCT GGGTGGCTAC GACCAGGCGC TGTGGTCGGC CAAGAAGCAC
CTGGCCAAGC AGAACATCGT CTTCCAGCCC GGCGTCAACG AAGAGCTGGC GGCCACCGCG
GTGTGGGGCA GCCAGCAGCT CGACATCCAT CCCAAGAGCA ACAAGTTCGA CGGCGTGTTC
GGCATCTGGT ACGGCAAGGG GCCGGGCGTG GACCGCTGCT CGGACGTCTT CAAGCACGCC
AACATGGCCG GCACCGCCCG CCACGGCGGC GTGCTGGCGA TCGCCGGTGA CGACCACGTC
GCCAAGAGCA GCACCGCCGC GCACCAGAGC GACCACATCT TCAAGGCCTG CGGGCTGCCG
GTTTTCTTCC CGGCCAGCGC GCAGGAGATC CTCGACATGG GCCTGCACGC GATCGCGCTG
AGCCGCTACG CCGGCGTCTG GTCGGGCATG AAGACGATCC AGGAGGTGGT GGAAAGCGCC
GCCTCGATCG AGATCGACCC GGACCGCGTG TCGATCGTGC TGCCCGAAGA CTTCGTGATG
CCGCCCGGCG GCCTGCACAT GCGCTGGCCC GACGACCGGA TCGAGCAGGA AGCCCGGCTG
ATGGACCACA AGTGGTACGC CGCGCTGGCC TATGTGCGCG CCAACCGGCT CAACCACACC
GTGATCGACA GCCCGAACGC GCGTTTCGGC ATCATGGCCA GCGGCAAGAG CTACAACGAC
ACCCGCCAGG CGCTGGCCGA CCTGGGGCTC GATGAAGCCA CCTGTCAGCG CATCGGCATC
CGGCTGCACA AGGTCGGCGT GGTCTGGCCG CTCGAAGCCA CCATCACGCG CGAGTTCGCG
CAGGGGCTGC AGGAAATCCT GGTGGTCGAG GAAAAGCGCC AGGTCATCGA ATACCAGCTC
AAGGAAGAGC TCTACAACTG GCGCGCCGAC GTGCGCCCGG ACGTGGTCGG CAAGTTCGAC
GAGGCCGAGG GCGACCACAG CGGCGGCGAA TGGAGCCGGC CGAACCCGAG CGCCAACGGG
CTGCTGCGCG CCAAGCTCGA CCTGACGCCG GCCATCATCG CCAAGGCGAT CGCCAAGCGG
CTGATCAAGC GCGGCGTGCC CGACGACGTG GTGGCGCGCA TGAACCAGCG CCTGGCCGTG
ATCGACGCCA AGGAGCGCTC GCTGGCGGCG CTGACCGTCA ACACCGGCGA GCGCACGCCC
TGGTTCTGCA GCGGCTGCCC GCACAACACC AGCACCCGCG TGCCCGAAGG CTCGCGCGCG
ATGGCCGGCA TCGGCTGCCA CTTCATGGCG CTGTGGATGG GACGTGACAC GGAGACCTTC
ACGCAGATGG GCGGCGAAGG CGTGCCGTGG GTCGGTCAGG CGCCGTTCAC CACCGACACC
CACCTGTTCG CCAACCTCGG CGACGGCACC TACTACCACT CGGGCCTGCT GGCGGTGCGC
CAGAGCATCG CCGCGGGCGT CAACATCACC TACAAGATCC TCTACAACGA CGCGGTGGCG
ATGACCGGCG GCCAGCCGGT CGACGGCATC CTGAAGGTGC CCGAGATGAC CCGCGAGCTC
GACGCCGAGG GCGCGAAGGT GATCGTGATC GTGACCGACG AGCCGGAGAA ATACGCCGAG
GTCAAAGCGC GCCTCGCACC CGGCGTGACG GTGCGGCACC GCGACGAACT CGACGCCGTG
CAGCGCGAAC TGCGCGCCAC GCCCGGCTGC ACGATCCTGA TCTACGACCA GACCTGCGCC
ACCGAAAAGC GCCGCCGCCG CAAGCGCGGC ACGCTGGTCG ACCCGGCCAG GCGCGTCGTC
ATCAACGAGC TGGTGTGCGA GGGCTGCGGC GATTGTTCGA CGCAGAGCAA CTGCCTGTCG
GTCGAACCGG TCGAGACCGA GTTCGGCCGC AAGCGCCGCA TCAACCAGAA CACCTGCAAC
AAGGATTTCT CGTGCGTGAA GGGCTTCTGC CCGAGCTTCG TGACGGTCGA AGGCGGCCAG
TTGCGCAAGC CCAAGAAGGA CGCCAAGCTC GACCCGGCCA GCCTGCCGCC ACTGCCCGAG
CCGGTGCTGC CGAGCGCGCG CGAGGCCTTC GGCATCGTCG TGGCCGGAGT CGGCGGCACC
GGCGTGATCA CGATCGGCCA GCTGCTGGGC ATGGCCGCGC ATCTGGAGGG CAAGGGCGTG
GTCACGCAGG ACAGCGCCGG CCTGGCACAG AAGGGGGGCG CCACCTGGAG CCACATCCAG
ATCGCCGACA GCGCGCTGGC GATCCACACC ACCAAGGTCG ACACCGCCAA GGCCGATCTG
GTGATCGCCT GCGACGGCAT CGTCGCGGCC AAGAAGGAGA CACTGTCGGC GATGGCCGAA
GGCCGCACCT TCGTGGCGCT GAACCTGCAC GCCGCACCGA CCGCAGCGCT GGTGCACGAC
CCGGACTGGG CCTTCCCGGT GGCCGGCTGC GAGGCCGCCC TGCGCCAGAC GGTGGGCGAT
GCGCGGCTGG GTGCGTTCGA CGCCGAGGAG GTGGCGGTCA AGCTGCTGGG TGACTCGATC
TACACCAACC CGCTGATGCT CGGCTACGCC TGGCAGAAGG GCCACGTGCC GGTGGGCCGC
GCCGCGCTGC TGCGGGCGAT GGAGCTGAAC GGCGTGCAGG CGGCCAACAA CCAGCAGGCC
TTCGAGTGGG GCCGGCGTTG CGCGCACGAC CTGGCCAGCG TCAGGAGCCA GTACCAGAGC
GCCCAGGTGA TCCAGCTCGT GCGGCGGCCG TCAGTCGACG AGCTGATCGC GCGGCGGGTC
GAGTTCCTGA CCGCGTATCA GAATGCCGGC TACGCCGAGC AGTACCGCCG CTTCGTCGAG
CGCGTGCGCA GCGCCGAGGC GCCGCTGGCG AGCACGCGCC TGACCGAGGC GGTGGCGCGT
TACCTCTTCA AGCTGATGGC CTACAAGGAC GAGTACGAGG TGGCGCGACT GCACGGCGAC
GCCGCGTTTG CCGCGCGCAT CGCGAGTCAG TTCGAGGGTG ACTACAAGCT GGTGCACCAC
CTCGCGCCGC CGATCCTGGG CAAGACCGAC GCGCAGGGGC AGCCGCTCAA GCAGGCCTTC
GGGCCGTGGA TGCACCGGGT GATGCCGATG CTGGCGCGTC TGAAGTTCCT GCGCGGCAGC
ACGTTCGACC CCTTCGGCCG GACCGAAGAA CGCCGCACGG AGCGGGCGCT GATCGGTGAA
TACCGGGCAT GCGTCGAGGA ACTGCTGACC GGGTTGAGCG CCGAACGGTT GACGCAGGCA
GTCGAGATTG CCCGGCTGCC GGAGGACATC CGCGGCTACG GCCCGGTCAA GGAGCGCCAC
CTCGCCGCCG TGCGCCCACG CTGGGCGCAG CTGATGACGG CCTGGCGCTC AGGCGCCGGT
CACCGCCAGG CGGCGTGA
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| Protein sequence | MNAPLPEAVR RALEAVTLDD KYTLGHGRAF MSGIHALVRL PMLQQLRDAR AGLNTAGFIS
GYRGSPLGGY DQALWSAKKH LAKQNIVFQP GVNEELAATA VWGSQQLDIH PKSNKFDGVF
GIWYGKGPGV DRCSDVFKHA NMAGTARHGG VLAIAGDDHV AKSSTAAHQS DHIFKACGLP
VFFPASAQEI LDMGLHAIAL SRYAGVWSGM KTIQEVVESA ASIEIDPDRV SIVLPEDFVM
PPGGLHMRWP DDRIEQEARL MDHKWYAALA YVRANRLNHT VIDSPNARFG IMASGKSYND
TRQALADLGL DEATCQRIGI RLHKVGVVWP LEATITREFA QGLQEILVVE EKRQVIEYQL
KEELYNWRAD VRPDVVGKFD EAEGDHSGGE WSRPNPSANG LLRAKLDLTP AIIAKAIAKR
LIKRGVPDDV VARMNQRLAV IDAKERSLAA LTVNTGERTP WFCSGCPHNT STRVPEGSRA
MAGIGCHFMA LWMGRDTETF TQMGGEGVPW VGQAPFTTDT HLFANLGDGT YYHSGLLAVR
QSIAAGVNIT YKILYNDAVA MTGGQPVDGI LKVPEMTREL DAEGAKVIVI VTDEPEKYAE
VKARLAPGVT VRHRDELDAV QRELRATPGC TILIYDQTCA TEKRRRRKRG TLVDPARRVV
INELVCEGCG DCSTQSNCLS VEPVETEFGR KRRINQNTCN KDFSCVKGFC PSFVTVEGGQ
LRKPKKDAKL DPASLPPLPE PVLPSAREAF GIVVAGVGGT GVITIGQLLG MAAHLEGKGV
VTQDSAGLAQ KGGATWSHIQ IADSALAIHT TKVDTAKADL VIACDGIVAA KKETLSAMAE
GRTFVALNLH AAPTAALVHD PDWAFPVAGC EAALRQTVGD ARLGAFDAEE VAVKLLGDSI
YTNPLMLGYA WQKGHVPVGR AALLRAMELN GVQAANNQQA FEWGRRCAHD LASVRSQYQS
AQVIQLVRRP SVDELIARRV EFLTAYQNAG YAEQYRRFVE RVRSAEAPLA STRLTEAVAR
YLFKLMAYKD EYEVARLHGD AAFAARIASQ FEGDYKLVHH LAPPILGKTD AQGQPLKQAF
GPWMHRVMPM LARLKFLRGS TFDPFGRTEE RRTERALIGE YRACVEELLT GLSAERLTQA
VEIARLPEDI RGYGPVKERH LAAVRPRWAQ LMTAWRSGAG HRQAA
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