| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3902 |
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| Symbol | |
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| ID | 6161933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4383458 |
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| End bp | 4384753 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641666680 |
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| Product | MltA domain-containing protein |
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| Protein accession | YP_001792921 |
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| Protein GI | 171060572 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2821] Membrane-bound lytic murein transglycosylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0352522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTTT CCTTCGCGTT CACCAGCCGC CTGATGCGGC CCGTCCGCTG GCCCTTGGCC
GGCGCGATTC TAGGCAGCCT GCTGGCCTGC GGCAGCGTAC CGACACCGCC GGCACCGGTC
GACGACGGCA GCACCCCGCC GCTGGCGAGC CCGCCGGCCG GCGCCGAGCC CGCCGCCAGC
ATCACCCCCG AGGTGCGGCA GACCGCACGC GGGCGCTGGG TGCGCGCCGA CTGGTCCGAG
CTGCCCGGCT GGCACGACGA CAGCCTGGCG CTCGCCTGGC CGGCGCTGCT GCGCAGCTGC
GAGCGCGTGC TGAGCCTGCC GGCCAACGGC AACGGCGCCG CAGCGGCCGC CGCAGCAGCG
TCGCCGCTGA CGATCACGCC GCAGCAGTTC TCGCAGAACT GGGCGCCGAG CTGCAACGCC
GCACGCGCGC TCGGCCCGGC GGCCGACGAC AGCCAGATCC GCAGCTTCCT GCAGGCGCGT
CTGCAGCCGT GGCGGGTCGA AGGCGGCGAA GGCCAGGTCG AGGGCCTGAT GACCGGCTAT
TTCGAGCCGC TGATCGAGGC CCGCCGCCAG CGCAGCGCCC GCTTCAGCGT GCCGCTTCAT
GCCCCGCCGG CCGATCTGGC CAGCCGCAAA CCCTGGTACA CCCGCGCCCA GATCGAGACC
CTGCCGGCCG CGCAGGCCGC ACTCAAGGAT CGCGTGATCG CCTGGGTGGC CGACCCGCTC
GACGCCCTGC TGGTGCAGAT CCAGGGCTCC GGGCGGCTGC TGATCGACGA GCCCGGCGGC
CAGCGCAAGA CCGTCCGGCT GGCCTACGCG GCGCACAACG ACCAGCCTTA CATGTCGATC
GGCCGCTGGC TGGTCGAACA GGGTGCGTTC ACGCTCGAGC AGGCCAACTG GCCGGCGATC
CGGCAGTGGG CGCGCAACAA CCCGCGGCGC CTGCGCGAGA TGCTCGACGT CAACCCGCGC
TACGTGTTCT TCCGCGAAGA GCCGATGCCC GACCCGAGCA TCGGCGCGAT CGGCGCGCAG
GGCGTGCCGC TGACGCCGGG ACGCTCGATC GCGGTCGACC GCAACAGCAT CCCGTACGGC
ACGCCGGTCT GGCTGGCCGC CACCGAACCG CAGCCGTGGC AGGTCAACCC GCCGCCGCCG
CGCCCGCTGC AGCGCCTGGT GATGGCGCAG GACACCGGCA GCGCGATCGT CGGCTCGGTG
CGGGCCGACT ACTTCTGGGG CTGGGGCGAC GGCGCCGAAG ACCGCGCCGG GCGCACCAAG
CAGCCGCTGC GGCTGTGGGT GCTCTGGCCG CGCTGA
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| Protein sequence | MSVSFAFTSR LMRPVRWPLA GAILGSLLAC GSVPTPPAPV DDGSTPPLAS PPAGAEPAAS
ITPEVRQTAR GRWVRADWSE LPGWHDDSLA LAWPALLRSC ERVLSLPANG NGAAAAAAAA
SPLTITPQQF SQNWAPSCNA ARALGPAADD SQIRSFLQAR LQPWRVEGGE GQVEGLMTGY
FEPLIEARRQ RSARFSVPLH APPADLASRK PWYTRAQIET LPAAQAALKD RVIAWVADPL
DALLVQIQGS GRLLIDEPGG QRKTVRLAYA AHNDQPYMSI GRWLVEQGAF TLEQANWPAI
RQWARNNPRR LREMLDVNPR YVFFREEPMP DPSIGAIGAQ GVPLTPGRSI AVDRNSIPYG
TPVWLAATEP QPWQVNPPPP RPLQRLVMAQ DTGSAIVGSV RADYFWGWGD GAEDRAGRTK
QPLRLWVLWP R
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