| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3900 |
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| Symbol | |
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| ID | 6161931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4380860 |
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| End bp | 4381246 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641666678 |
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| Product | ApaG domain-containing protein |
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| Protein accession | YP_001792919 |
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| Protein GI | 171060570 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2967] Uncharacterized protein affecting Mg2+/Co2+ transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.195593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGGC GCATGAGTGC ACCCTCTTTC AGCTGCTCGG TGAGCACGCA GTTCCTGCCC
GAACAAACCG ACCCGGTGCA AGGCCTGTAC GCCTTCGCCT ACACCATCGT GATCAGCAAC
ACCGGCAGCG TGCCGGGCCA GCTGATCGGA CGGCACTGGA TCATCACCGA CGCCGCCGGC
CACACCGAAG AAGTGCGCGG CCTGGGCGTG GTCGGCCACC AGCCGATGCT CAAGCCCGGC
GAGCAGTTCG AGTACACCAG CTGGACCCGC CTGGCGACGC CGCACGGGCG CATGCGCGGC
ACCTTCTTCT GCATGACCGA AGACGCCCAC AGCTTCGAGG CGCCGATCCC CGTCTTCGAA
CTGGCGCAAG CGCGCGCACT GCATTGA
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| Protein sequence | MIRRMSAPSF SCSVSTQFLP EQTDPVQGLY AFAYTIVISN TGSVPGQLIG RHWIITDAAG
HTEEVRGLGV VGHQPMLKPG EQFEYTSWTR LATPHGRMRG TFFCMTEDAH SFEAPIPVFE
LAQARALH
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