| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3888 |
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| Symbol | |
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| ID | 6162338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4361471 |
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| End bp | 4362481 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641666666 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_001792907 |
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| Protein GI | 171060558 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCC TGCCCGTGAC GAGCGCCACC GTCCGCCTGC GCCGCGTGTC GACCGGGCTG
CTGACGGCGC TGGTGATGGG GGTGGCGAGC CTGTCGAGCG GCCCGGCGCT CGCGCAATCG
GTGTTCGCCG CGCGGGTCAA CGGCGTGGGC ATCCCGGCGC AGCGGCTGGA GCGCCAGTTC
GAGGCGCTGC TGCGCGAACG CCAGATCCAC ATCGCCCGCC TGCAGAACCC GGCCCGGGCG
CGCGAACTCC GGCGCGAGGC GCTCGACCGC CTGATCGGCA TCGAGCTGCT GGGGCAGCAG
GCGCGTGCGC TGGGGCTGGA AGCCGATGAC GCGGCGGTCG AGCGCGCCAT CACCGAGGCG
CGCAGCCGCT TCCGCTCGGC CGAGGTGTTT GCGCAGCGCA TCGCGATCGA GGGCCACGAC
GAGGCCAGCC ACCGCGAACA CACCCGCAAG CTGCTGTCGG GCGAGCGCCT GGCGCAGCGC
ATCGTCGATC GCGAGGTGCA CATCACCGAG GCCGACATCG CCGCCTTTCA CGAGGCCAAC
CCGGCGCTGT TCCGGCGCCC GGAGCAGGTC CGGGTGCGCC AGCTCCTGGT GGCGCTGCCC
GCTGACGCCG AGCCTGCGCT CAAGGCGCAG GCGCGCAGCC GCATCGAGGC GCTGCTGGTG
CGCGCCCGGG CCGGCGAGAG CTTCGAGGCG CTGGCCCGCA CACACTCGGA CGCGCCGACC
CGCCAATGGG GCGGCGCGCT CGATCCCTTC GGCCGCGGCA GCCAGCCCCG GGCGATCGAG
GACGCCGCGT TCGCGCTCGC CCCCGGCGCG CTGTCGGAGG TGATCGAGAC GTCGGCCGGC
TGGCAGATCC TGCAGCTCGA CGAGCGCATC GCCGCCGTGT CGGTGCCGCT GGACGAGGTG
CGCGAGCGCA TCCGCCGGCA CCTGCACGAC GGCCGCGGCC AGCAGGCGGT CGAGCGCGAG
ATCGCGCGGC TGCGCGAGCA GGGCCGGGTC GAGCTGCTGA TGCCGCTTTG A
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| Protein sequence | MNALPVTSAT VRLRRVSTGL LTALVMGVAS LSSGPALAQS VFAARVNGVG IPAQRLERQF
EALLRERQIH IARLQNPARA RELRREALDR LIGIELLGQQ ARALGLEADD AAVERAITEA
RSRFRSAEVF AQRIAIEGHD EASHREHTRK LLSGERLAQR IVDREVHITE ADIAAFHEAN
PALFRRPEQV RVRQLLVALP ADAEPALKAQ ARSRIEALLV RARAGESFEA LARTHSDAPT
RQWGGALDPF GRGSQPRAIE DAAFALAPGA LSEVIETSAG WQILQLDERI AAVSVPLDEV
RERIRRHLHD GRGQQAVERE IARLREQGRV ELLMPL
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