Gene Lcho_3878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3878 
Symbol 
ID6163448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp4351105 
End bp4351671 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content67% 
IMG OID641666656 
Productglutamine amidotransferase of anthranilate synthase 
Protein accessionYP_001792897 
Protein GI171060548 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0512] Anthranilate/para-aminobenzoate synthases component II 
TIGRFAM ID[TIGR00566] glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGA TGATCGACAA CTACGACTCC TTCACGTTCA ACCTCGTGCA GTACTTTGCC 
GAGTTGGGCG AGGACGTGCG GGTGCACCGC AACGACGAGA TCTCGATCGC CGAGATCGAG 
GCCCTCAAGC CCGACCGCCT GGTGCTGTCG CCGGGGCCGT GTTCGCCGGC CGAGGCGGGC 
ATCTGCATCG AGAGCATCCG TCACTTTGCC GGCAAGCTGC CGATCCTGGG CGTGTGCCTG 
GGGCACCAGA GCATCGGCGC GGCGCTGGGT GGCCACATCG TGCGGGCGCA GACCCAGATG 
CACGGCAAGG CCGACACCAT CACGACCGAC CAGCAGGGCG TGTTCGCCGG GCTGCCGCGG 
CAGTTCAGCG TGGTGCGCTA CCACTCGCTG GCGATCGAGC GCGAGAGCCT GCCGGCCGAG 
CTGGTGGTCA CCGCCACCAG CGAGGACGGC GAGATCATGG GCGTGCGCCA CAGGACGCTG 
GCGATCGAGG GCGTGCAGTT CCACCCCGAA TCGATCCTCA GCGAACACGG CCACGCGATG 
CTGAAGAACT TCCTGCAGAC GCGCTGA
 
Protein sequence
MLLMIDNYDS FTFNLVQYFA ELGEDVRVHR NDEISIAEIE ALKPDRLVLS PGPCSPAEAG 
ICIESIRHFA GKLPILGVCL GHQSIGAALG GHIVRAQTQM HGKADTITTD QQGVFAGLPR 
QFSVVRYHSL AIERESLPAE LVVTATSEDG EIMGVRHRTL AIEGVQFHPE SILSEHGHAM 
LKNFLQTR