| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3875 |
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| Symbol | |
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| ID | 6161045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4348471 |
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| End bp | 4349217 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666653 |
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| Product | uracil-DNA glycosylase |
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| Protein accession | YP_001792894 |
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| Protein GI | 171060545 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0692] Uracil DNA glycosylase |
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| TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCAT TGCTGTTACC GCCGGTCTGC GTGCCCGACA ACCGGTTGCA GGCGCCGTTG
GCCGACGCGT TTCGCCAGGT TGCGCCTCGT TGGCGCGGGC TGTGCGATCG ATTCCTCGCC
AGCGAGGCCG GTCGCTCGCT GTGCGTCGAG GTCGACCGGC GTGTGGCTGC CGGCACGCCG
GTTTTTCCTC GCCAGCCGTT GCGTGCGCTG AGGGCGCTCG AGCCTGCCAA TGTCCGGGTC
GTGATCCTCG GGCAGGATCC GTACCACGGC GCCGGCGAGG CCGAAGGGCT GGCGTTTTCG
GTCCCCGAGG GGGTCCGGAT CCCGCCCAGC CTGCGCAACA TCCACCAGGA ACTGATGACC
GACGTCGGCA TCGCGCGGCC GGGTCACGGC AGCCTGTCCC GCTGGGTCGG GCAGGGCGTG
CTGTTGCTCA ACAGCAGTCT GAGCGTCGAC CAGGACCGTG CCGGCAGCCA CGCCCGTCTG
GGCTGGCGGG ACTTCACCGA CGCCGTCATC GCGCAGGTTG CCGCCGATCC GTCGCCCAAG
GTTTTCATGT TGTGGGGTGC CCATGCTCAA GCCAAGCGCG CGCTGATCAA CGCCAGCGGC
CCGGCGCATC TGTGTTTGTG CTCGAACCAT CCATCGCCGT TGTCGGCACG CCGCCCACCG
GTGCCGTTCA TCGGCAGCGC CCCCTTCAGC CGTGCGGCTG GCTGGCTGGC GTCGATGGGA
CGAGGCGCGA TTGATTGGCA TTTGTAG
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| Protein sequence | MSALLLPPVC VPDNRLQAPL ADAFRQVAPR WRGLCDRFLA SEAGRSLCVE VDRRVAAGTP
VFPRQPLRAL RALEPANVRV VILGQDPYHG AGEAEGLAFS VPEGVRIPPS LRNIHQELMT
DVGIARPGHG SLSRWVGQGV LLLNSSLSVD QDRAGSHARL GWRDFTDAVI AQVAADPSPK
VFMLWGAHAQ AKRALINASG PAHLCLCSNH PSPLSARRPP VPFIGSAPFS RAAGWLASMG
RGAIDWHL
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