| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3863 |
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| Symbol | |
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| ID | 6161176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4329913 |
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| End bp | 4332015 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641666636 |
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| Product | elongation factor G |
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| Protein accession | YP_001792882 |
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| Protein GI | 171060533 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGCC AGACCCCCAT CGAGCGGTAC CGGAACATCG GTATCTCGGC TCACATCGAC
GCCGGCAAAA CCACCACCAC CGAGCGCATC CTGTATTACA CGGGTGTGAA CCACAAGATC
GGTGAAGTCC ACGATGGCGC CGCCACGATG GACTGGATGG AGCAGGAGCA AGAGCGCGGC
ATCACCATCA CGTCGGCCGC GACGACCTGC TTCTGGAAGG GCATGGACCG CTCGCTGCCG
GAACACCGTT TCAACATCAT CGACACCCCC GGGCACGTCG ACTTCACGAT CGAAGTCGAG
CGTTCGATGC GCGTGCTCGA CGGTGCCTGC ATGGTCTATT GCGCCGTCGG CGGCGTGCAG
CCGCAGTCGG AAACCGTCTG GCGCCAGGCC AACAAGTACA AGGTGCCCCG CCTCGCGTTC
GTCAACAAGA TGGACCGCAC CGGCGCGAAC TTCTTCAAGG TCGTCGACCA GATGAAGACC
CGCCTGCGCG CCAATCCGGT GCCGGTGGTG GTGCCGATCG GCGCCGAAGA CAGCTTCACC
GGCGTGGTCG ACCTGCTGAA GATGAAGGCC ATCATCTGGG ACGAAGCTTC CCAGGGCATG
AAGTTCAGCT ACGAAGACAT CCCGGCCGGC CTCGAAGGCG TGGCCCAGGA ATGGCGCGAG
AAGATGGTCG AGGCCGCGGC CGAAGCCAGC GAAGAGCTGA TGAACAAGTA CCTCGAGACG
GGCGACCTGA CCGAGGACGA GATCAAGCTC GCGCTGCGCA CCCGCACCAT CGCCTGCGAG
ATCCAGCCGA TGCTGTGCGG CACCGCGTTC AAGAACAAGG GCGTGCAGCG CATGCTCGAC
GCCGTGATCG ACTACCTGCC GTCGCCGGTG GACATCCCCC CGGTCACCGG CACCGACGAC
GACGATCAGC CGATCAGCCG CCGCGCCGAC GACAAGGAGA AGTTCTCCGC CCTGGCGTTC
AAGCTGATGA CCGACCCGTT CGTTGGCCAG CTGACCTTCG TGCGCGTCTA TTCGGGCGTG
CTGCAGTCGG GTTCGAGCGT CTACAACCCG ATCCGCGGCA AGAAGGAGCG CATCGGCCGG
ATCCTGCAGA TGCACGCCAA CCAGCGTGAA GAAATCAAGG AGATCCTGGC CGGCGACATC
GCCGCCTGCG TGGGCCTGAA GGAAGTCACC ACGGGCGAGA CCCTGTGCGA CATCGACTCG
CCGATCACGC TGGTGAAGAT GATCTTCCCG GAGCCGGTGA TCTCGCAGGC TGTCGAGCCC
AAGACCAAGG CCGACCAGGA AAAGATGGGC ATCGCGCTGG GCCGTCTGGC TGCCGAAGAT
CCGTCGTTCC GCGTGCGCAC CGACGAAGAA TCGGGCCAGA CCATCATTTC CGGCATGGGC
GAGCTGCACC TGGAAATCAT CGTCGACCGC ATGAAGCGCG AGTTCGGCGT GGAAGCCAAC
GTCGGCAAGC CGCAGGTGGC GTATCGCGAA ACGATCCGTG ACCTGGTCAA GGACGTCGAA
GGCAAGTTCG TGCGCCAGTC GGGCGGCAAG GGCCAGTACG GTCACGTCGT GCTGACCGTC
GAGCCGCAGG AGCCGGGCGC CGGCTTCCAG TTCGTCGACG CCATCAAGGG CGGCGTCGTG
CCCCGCGAGT TCATCCCCGC GGTGGAAAAG GGCCTGATCG ACACGCTGCC CAACGGCGTG
CTGGCCGGTT TCCCGGTGGT CGACGTCAAG GTCACGCTGA CCTTCGGTTC GTACCATGAA
GTCGACTCGA ACGAAAACGC CTTCAAGATG GCGGCGTCGA TGGGCTTCAA GGACGGCATG
CGCAAGGCCA AGCCGGTGAT CCTCGAGCCG ATGATGGCCG TGGAAGTCGA GACCCCGGAA
GACTACGCCG GCACGGTGAT GGGCGACCTG TCCAGCCGCC GCGGCATGGT CCAGGGCATG
GACGACATGG TCGGTGGCGG CAAGGTCATC AAGGCCGAAG TCCCGCTGTC GGAAATGTTC
GGCTACTCGA CCTCGCTGCG CTCGGCCACG CAAGGCCGCG CCACGTACAC GATGGAGTTC
AAGCACTACA GCGAAGCTCC GAAGAACGTG GCCGACGCGA TCATCACCGC TCGCGGCAAG
TAA
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| Protein sequence | MARQTPIERY RNIGISAHID AGKTTTTERI LYYTGVNHKI GEVHDGAATM DWMEQEQERG
ITITSAATTC FWKGMDRSLP EHRFNIIDTP GHVDFTIEVE RSMRVLDGAC MVYCAVGGVQ
PQSETVWRQA NKYKVPRLAF VNKMDRTGAN FFKVVDQMKT RLRANPVPVV VPIGAEDSFT
GVVDLLKMKA IIWDEASQGM KFSYEDIPAG LEGVAQEWRE KMVEAAAEAS EELMNKYLET
GDLTEDEIKL ALRTRTIACE IQPMLCGTAF KNKGVQRMLD AVIDYLPSPV DIPPVTGTDD
DDQPISRRAD DKEKFSALAF KLMTDPFVGQ LTFVRVYSGV LQSGSSVYNP IRGKKERIGR
ILQMHANQRE EIKEILAGDI AACVGLKEVT TGETLCDIDS PITLVKMIFP EPVISQAVEP
KTKADQEKMG IALGRLAAED PSFRVRTDEE SGQTIISGMG ELHLEIIVDR MKREFGVEAN
VGKPQVAYRE TIRDLVKDVE GKFVRQSGGK GQYGHVVLTV EPQEPGAGFQ FVDAIKGGVV
PREFIPAVEK GLIDTLPNGV LAGFPVVDVK VTLTFGSYHE VDSNENAFKM AASMGFKDGM
RKAKPVILEP MMAVEVETPE DYAGTVMGDL SSRRGMVQGM DDMVGGGKVI KAEVPLSEMF
GYSTSLRSAT QGRATYTMEF KHYSEAPKNV ADAIITARGK
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