| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3859 |
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| Symbol | |
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| ID | 6161172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4326423 |
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| End bp | 4327595 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666632 |
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| Product | L-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_001792878 |
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| Protein GI | 171060529 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGTCA TCACCACCAT CGAAGACCTG CGTGTTCTGG CCGAGAAGCG CGTGCCGCGC
ATGTTCTACG ACTACGCCGA TTCCGGCTCG TGGACCGAGA GCACCTACCG CGCCAACGAG
AGCGAGTTCC AGAAGATCAA GCTGCGCCAG CGCGTCGCGG TCAACATGGA GAACCGCAGC
ACCGCCGTCA AGATGATCGG CATCGACGCC CGGATGCCGG TGGCGATCGC GCCGGTCGGC
CTGACCGGCA TGCAGCACGC CGACGGCGAG ATCCACGCCG CGCGCGCGGC CGAGAAGTTC
GGCATCCCGT TCACGCTCTC GACCATGAGC ATCTGCTCGA TCGAGGACAT CGCGCAGAAC
ACCACCGCGC CGTTCTGGTT TCAGCTCTAC ATGATGCGCG ACCGCGACGC GATGGCCCGC
ATGATCGAAC GCTGTCGCGC CGCCAAGTGC AGTGCGCTGG TGCTGACGCT CGACCTGCAG
GTGATCGGCC AGCGCCACAA GGATCTCAAG AACGGCCTGA CCGCGCCGCC CAGGCCGACG
CTCAAGAACA TCATCAACCT GATGACCAAG CCGCGCTGGT GCCTCGGCAT GGCGGGCACC
CGGCGCCACA CCTTCCGCAA CCTGGTCGGC CACGTCAAGG GCGTGAGCAA CATGCGCTCG
CTGTCGGCCT GGACCAACGA GCAGTTCGAC CCCACCTTGT CGTGGGCCGA CGTGGCCTGG
GTCAAGGCGC AATGGGGCGG CAAGCTGATC CTGAAAGGAA TCCAGGACGT CGAAGACGCC
AGGCTCGCGG TGGCCAGCGG CGCCGACGCG ATCGTCGTCA GCAACCACGG CGGCCGCCAG
CTCGACGGCG CGCTGAGCTC GATCGAGGCC CTGCCGGCGA TCGTCGAGGC GGTCGGCGAC
CGGATCGAGG TCTGGATGGA CGGTGGCATC CGCAGCGGCC AGGATGTGCT GAAAGCCTGG
GCGCTCGGCG CCCGCGGCAC GATGATCGGC CGCGCGATGG TCTACGGCCT GGGCGCGATG
GGCGAGGCCG GCGTCACCAA GGCGCTGGAG ATCCTGCACA AGGAGCTCGA CGTGACGATG
GCCTTCTGCG GCCACACGAA GCTGACCAAC GTCGACCGCC GCATCCTGGT GCCGGGCTCC
TATCCGCTGC CGAGCGCGAA CCCGGTCGAC TGA
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| Protein sequence | MTVITTIEDL RVLAEKRVPR MFYDYADSGS WTESTYRANE SEFQKIKLRQ RVAVNMENRS
TAVKMIGIDA RMPVAIAPVG LTGMQHADGE IHAARAAEKF GIPFTLSTMS ICSIEDIAQN
TTAPFWFQLY MMRDRDAMAR MIERCRAAKC SALVLTLDLQ VIGQRHKDLK NGLTAPPRPT
LKNIINLMTK PRWCLGMAGT RRHTFRNLVG HVKGVSNMRS LSAWTNEQFD PTLSWADVAW
VKAQWGGKLI LKGIQDVEDA RLAVASGADA IVVSNHGGRQ LDGALSSIEA LPAIVEAVGD
RIEVWMDGGI RSGQDVLKAW ALGARGTMIG RAMVYGLGAM GEAGVTKALE ILHKELDVTM
AFCGHTKLTN VDRRILVPGS YPLPSANPVD
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