Gene Lcho_3856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3856 
Symbol 
ID6161209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4323680 
End bp4323982 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content64% 
IMG OID641666629 
Productantibiotic biosynthesis monooxygenase 
Protein accessionYP_001792875 
Protein GI171060526 
COG category[R] General function prediction only 
COG ID[COG2329] Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTCG AAGTTGCCGA CATCCGCATC CAGCCCGGCC GCCAGGCCGA ATTCGACGCC 
GCGATCCAGC TCGGCCTGAA CACCGTGATC GCCAAGGCCA AGGGTTTCAG CGGTTTCAAG
GTCAACAAGG GCATCGAGTC GCCCGAGCGC TACGTGCTGA TGATCTGGTG GGCCACGCTG
GAGAACCACA CGGTCGACTT CCGCCAGTCG CCGGCGTTTG CCGACTGGCG CGCCATCGTC
GGGCCGTTTT TCGCCCAGCC GCCGGTGGTG GAGCATTTCG AGCTGCTGGC CAAGTCAGAG
TGA
 
Protein sequence
MILEVADIRI QPGRQAEFDA AIQLGLNTVI AKAKGFSGFK VNKGIESPER YVLMIWWATL 
ENHTVDFRQS PAFADWRAIV GPFFAQPPVV EHFELLAKSE