Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3855 |
Symbol | |
ID | 6161208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 4323192 |
End bp | 4323584 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641666628 |
Product | hypothetical protein |
Protein accession | YP_001792874 |
Protein GI | 171060525 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTTCAG GGATTTTCAT GAAATTAAAG TTTTTGGCGC TTGCATGCGT GGTCGCGCTT GGTGGTTGTT CTTCCATCAT CAAAGGAACC AGCGAAACGA TCAGCGTGAA TTCAATCGAG AAAGGCACTA CCATTTATGT GGATGGTGCA GCTCGCGGGT TGGATAGTGC GAGCGTCAGT GTCAAGAAGG GCAAGCCGCA CAGCATTCGA GCAGAGAAAG ATGGTTGTCA GGCGGTCACA GCAGACACAA CCGAAACCTT CGATCCCACG TCGTTGCTCG GAATTCTGCT TGATTTCGGT ATTTTCAGTA TCCCGATCGA TTTGATGTCT GGGGCAGCTT GGAAGGTTGA GCCGACTACC TACACGGTCA CACCAATTTG CCAGAAGCAA TAA
|
Protein sequence | MTSGIFMKLK FLALACVVAL GGCSSIIKGT SETISVNSIE KGTTIYVDGA ARGLDSASVS VKKGKPHSIR AEKDGCQAVT ADTTETFDPT SLLGILLDFG IFSIPIDLMS GAAWKVEPTT YTVTPICQKQ
|
| |