| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3849 |
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| Symbol | |
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| ID | 6162624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4316408 |
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| End bp | 4317901 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641666622 |
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| Product | histidine kinase |
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| Protein accession | YP_001792868 |
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| Protein GI | 171060519 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3851] Signal transduction histidine kinase, glucose-6-phosphate specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAG CCTTGCCGTT CGACCTGCCG CGCCTGGTGA TGCGGCGCGC CATCGCGGTC
GGCGCGGCGG CGCTGCTGCT GGCCGCGGTG CTGGGGCTGG TGCGCGTGGG CGACAACATC
GACGACGAGG TCGACGCCGC GATGGCGCTG GCCGGCGTGA TGGCGCGCCT GGGCAGCGTG
CAGCAGACCG ACGACCGCAG CGCGATCGAC GCGCTGCTCG CCACGCTGGC CGGCGGCGGC
CTGCGCCACC TCGACCTGCA CGTCCTCGAC GAGCACGGCC ACGTGCTGCT GCGGCCGGCG
CCGAGCCCAC CCGACGCCGC CGGGCTGGGC TGGCTCTACG ACCTGCACCG GCGCCTGCTG
TCGCGCCCCG ACAGCCGGCG CGTCACCTGG CAGCTGGCAC GCCCCGATGG CCGGGTCTGG
CGGGTCTCGC TCAGCGCCTC GCACGAGAGC GAACGCATCG AGGCGCTCAA CAATCTGGCC
GGCGCGCTGG CGCTGCTGCT GGCCTGCATC GCCGGGCTGC TGCTGGTGAT GGCCTGGAAC
GTGCGCCGCG CCTTCGCGCC GCTGGCCGGC CTGCTGGCGG CGATCGAGCG CATCGAGCAC
CACGACCCCG ACGGCGTGCG GCGCCTGCCG GCGATGCCGA TCCGCGAGCT CGAAGCCATC
GCCGCCGCCC TGCGCCACCT GGTGCAGGGA CTCGATGCCG CCGAAACGCA GCGCCAGCTG
CTCAGCCAGA AGGTGCTGAC GCTGCAGGAG GACGAACGCG CGCTGCTGGC GCGCGAGCTG
CACGACGAGT TCGGCCAGCG CCTGACGGCC TTGCGTTTCG ACGCCGCCTG GCTGGTGCGG
CGGCTGGCCG ATCAGCCCGA GCTGTGCGCC GTGGCGCAAG GCATGGCCGA GCGCTGCGGC
GAAGTGCAGC GCGACATCCG CGACCTGCTG GTGCGGCTGC GCCCGCTCGG CCCCGGCGAC
GACGGCGCCG GCCAGCCGCT GCCGATCAGC CGCCTGATCC AGCAGCTGCA GGGACTGGTG
CAGAGCTGGC AGGACAGCCA GGCGCGCAGC CAGTCCACGC CGATGACCTA CCACCTGGCG
CTGGCCTGGC AGGACGAACA CGGCGCGGTG GGGCCGATCG ACGCCTCGAT GGCCGAGCGG
TTCGGCCTGC CGCGCGACGT GGCGCTGGCG GTCTACCGGC TCAGCCAGGA GGCGCTGACC
AACGCCGCCC GCCACGCCCG GGCACGCGAG GTGCGCCTGC GCCTGGTGGT GCAGGCCGGC
CGCGAGCCGC CGTGGGCCGG CGCGCAGCTG CACTGGTCGG TCGAGGACGA CGGCGTCGGC
ATCGCCGACC CGGCCGCCGC GCTGCAGCAG GGCAACGGCC TGGGCGGCAT GCAGGAGCGG
GTCTGGGCGC TCGGCGGGCT GTGGGCCTGG GGGCCGACCG ACCGCCCGGG CCTCGCGCTG
CACGCGACAC TGCGGTTCCA GCCCGCCAGT CCGACCCCAC CGCCGTCCGC CTGA
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| Protein sequence | MNKALPFDLP RLVMRRAIAV GAAALLLAAV LGLVRVGDNI DDEVDAAMAL AGVMARLGSV
QQTDDRSAID ALLATLAGGG LRHLDLHVLD EHGHVLLRPA PSPPDAAGLG WLYDLHRRLL
SRPDSRRVTW QLARPDGRVW RVSLSASHES ERIEALNNLA GALALLLACI AGLLLVMAWN
VRRAFAPLAG LLAAIERIEH HDPDGVRRLP AMPIRELEAI AAALRHLVQG LDAAETQRQL
LSQKVLTLQE DERALLAREL HDEFGQRLTA LRFDAAWLVR RLADQPELCA VAQGMAERCG
EVQRDIRDLL VRLRPLGPGD DGAGQPLPIS RLIQQLQGLV QSWQDSQARS QSTPMTYHLA
LAWQDEHGAV GPIDASMAER FGLPRDVALA VYRLSQEALT NAARHARARE VRLRLVVQAG
REPPWAGAQL HWSVEDDGVG IADPAAALQQ GNGLGGMQER VWALGGLWAW GPTDRPGLAL
HATLRFQPAS PTPPPSA
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