| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3845 |
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| Symbol | |
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| ID | 6162620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4311700 |
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| End bp | 4312662 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666618 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001792864 |
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| Protein GI | 171060515 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCC GCACCGCACT CGCCGCAACC CTGCTCGGCC TCGGCCTGTT GAGCCAGGCG
CACGCCGCCG CACCGCTGGC CAAGACCCAG GCGCCGGGTT ACTACCGCAT GATGCTGGGC
GATTTCGAGG TCACCGTGAT CAACGACGGC ACCGTCGGGC TGCCGATCAC CAAGCTGCTG
ACCGCCACCA CGCCCGAGGC CACCGAGCGT GCGCTGGCGC GCAGCTTCCT GAAGGATCCG
GTCGAGACCT CGGTCAACGC CTTCCTGGTC AACACCGGCG CCAAGCTGGT GCTGATCGAC
GCCGGCGCCG GCAGCCTGTT CGGCCCGACG CTGGGCAAGC TGGTCGCCAC GCTCAAGGCC
TCGGGCTACC AGCCCGAGCA GGTCGACGAG ATCTACATCA CCCACCTGCA CGCCGACCAC
GTCGGCGGCC TGGGCCAGAG CGAGCAGCGC GTGTTCCCCA ACGCCGTGAT CCGCGCCGAC
AAGCGCGACG CCGACTTCTG GCTCAGCCAG GCCAACCTCG ACGCCGCGGC GCCCGAGAAC
AAGGGCTTCT TCCAGGGCGC GATGGCGTCG ATGAACCCTT ACGTCAAGGC CGGCAAGTTC
AAGCCCTTCG AGGCGAACAC CGAACTGGTG CCCGGCGTGC GCTCGCAGGC CAGCGTCGGC
CACACCCCCG GCCACAACTT CTACGTGGTC GAGAGCAAGG GCGAGAAGCT GGTGCTGTGG
GGCGACGTGA TGCACGCCGC GGCGGTGCAG TTCATGTCGC CGACCATCAC CATCGCCTTC
GACGTGGACG CCAAGTCCGC CGCCGAACAG CGCCTGAAGG CCTACGCCGA AGCGGCCGAG
AAGGGCTACT GGGTCGGCGC CACGCACGTC GCCTTCCCGG GCCTGGGCCG GCTGCGCGCG
GCCGAGGGCG GTGCGTATGT GTTCGTGCCG GTCAACTATT CGAACGGCGG CAGCCAGCCT
TGA
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| Protein sequence | MKIRTALAAT LLGLGLLSQA HAAAPLAKTQ APGYYRMMLG DFEVTVINDG TVGLPITKLL
TATTPEATER ALARSFLKDP VETSVNAFLV NTGAKLVLID AGAGSLFGPT LGKLVATLKA
SGYQPEQVDE IYITHLHADH VGGLGQSEQR VFPNAVIRAD KRDADFWLSQ ANLDAAAPEN
KGFFQGAMAS MNPYVKAGKF KPFEANTELV PGVRSQASVG HTPGHNFYVV ESKGEKLVLW
GDVMHAAAVQ FMSPTITIAF DVDAKSAAEQ RLKAYAEAAE KGYWVGATHV AFPGLGRLRA
AEGGAYVFVP VNYSNGGSQP
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