| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3837 |
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| Symbol | |
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| ID | 6161437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4301312 |
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| End bp | 4301848 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666610 |
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| Product | ATP-dependent protease peptidase subunit |
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| Protein accession | YP_001792856 |
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| Protein GI | 171060507 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.552553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTCCT TCCACGGCAC CACGATCCTC AGCGTGAGGC GCGGCGAGCA GGTCGCCATG
GGCGGTGATG GCCAGGTCAC CCTGGGCCAC ATCGTCGTCA AGGCCAGCGC ACGCAAGGTG
CGCCGGCTGT ATCGCGAACA GGTGCTGGCC GGTTTTGCCG GCGCCACCGC CGATGCCTTC
ACGCTGTTCG AGCGTTTCGA ATCCAAGCTC GAGAAACACC AGGGCCATCT GGTGCGCGCC
GCCGTCGAAC TGACGCGCGA CTGGCGCACC GACCGCGTGC TGCGCCGCCT CGAGGCCATG
CTGGCGGTGG CCGACCGCAG CGCCTCGCTG ATCATCACCG GCAACGGCGA CGTGCTCGAG
CCCGAGTACG GCATCGTCGC GATCGGATCC GGTGGCGCCT ACGCCCAGGC GGCCGCCCGC
GCCATGCTGC AGCACACCGA ACAGTCGCCG GCCGACATCG TCAAGCGTTC GCTCGAGATC
GCCGGCGACC TGTGCATCTA CACCAACCAG TCGCACACCA TCGAGACCCT CGAATGA
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| Protein sequence | MESFHGTTIL SVRRGEQVAM GGDGQVTLGH IVVKASARKV RRLYREQVLA GFAGATADAF
TLFERFESKL EKHQGHLVRA AVELTRDWRT DRVLRRLEAM LAVADRSASL IITGNGDVLE
PEYGIVAIGS GGAYAQAAAR AMLQHTEQSP ADIVKRSLEI AGDLCIYTNQ SHTIETLE
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