Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3835 |
Symbol | |
ID | 6161435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4298949 |
End bp | 4299437 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641666608 |
Product | TraR/DksA family transcriptional regulator |
Protein accession | YP_001792854 |
Protein GI | 171060505 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1734] DnaK suppressor protein |
TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.827568 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACTGA ACGACGCCAT CCGCTCGGCC AACAAAGCCG ACCCGAAACT CGCCAACGCC TGGAAGAACA AGTCCGGCCG CGAGCTGAGC GTGGCCGAGT TGCTCTCGAT GCCCGAGAGC GAATACATGA ACGAGAAGCA GCTCGAATTC TTCCGCTCGA TCCTCGAGCA GCAGAAGAAC GACCTGCTGA TGAATGCCGG CGAGACCACC GAGCACCTGC GCGAAGACAC CACGATCGTG CCCGATCCGG CAGACCGCGC CACGATCGAG GAAGAGCATG CCCTCGAGCT GCGCACGCGA GACCGCGAAC GCAAGCTGCT GAAGAAGATC TCGCAGGCGC TCGCCAGCAT CGAATCTGGT GACTACGGTT ACTGTGATGA AACAGGTGAA CCGATCGGTC TGGGGCGTTT GCTCGCCCGA CCCACCGCTA CACTCTCGCT GGAAGCGCAA CAGCGCCGGG AACTCAAACA AAAACTGTTC GGCGACTGA
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Protein sequence | MPLNDAIRSA NKADPKLANA WKNKSGRELS VAELLSMPES EYMNEKQLEF FRSILEQQKN DLLMNAGETT EHLREDTTIV PDPADRATIE EEHALELRTR DRERKLLKKI SQALASIESG DYGYCDETGE PIGLGRLLAR PTATLSLEAQ QRRELKQKLF GD
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