| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3827 |
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| Symbol | |
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| ID | 6161891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4289367 |
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| End bp | 4290602 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641666600 |
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| Product | cytochrome oxidase assembly |
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| Protein accession | YP_001792846 |
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| Protein GI | 171060497 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.502475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCCG AACTGATCGA TCTCTCGCCG CTCGCCTGGC TGGTGCTGGT CGGACTGCTG
GTGGCCGCCG GGCCGCTGGC CTGGCTGGTC CGGCGCCAGC GTGGTGCCAG CACGCCGCAG
CGCCTGCGCG CGCTGACCTT GCTGACGCTG TTCCTGACCT TCGACCTGGT GCTGTTCGGC
GCCTACACGC GCCTGAGCGA TTCGGGCCTT GGCTGCCCCG ACTGGCCCGG CTGCTACGGC
AGCGCCACGC CGCTGGGCGC GCACAGCGAG ATCAGCCAGG CCCAGGCCGC ACTGCCCAGC
GGCCCGGTAA CGCACGGCAA GGCCTGGGTC GAGATGGTGC ACCGCTACCT CGCCAGCGGC
GTCGGCATGC TGCTGACGGT GCTGATGGTC TGGAGCTGGC GGGCCGCCCG CCGCGAAGGC
CGTGGCGCCG GCGGCATCGC ACCGGCCTGG GCGACGCTGA GCTTCGTCTG GGTCTGCCTG
CAAGGCGCTT TCGGCGCGCT GACCGTGACG ATGAAGCTCT ACCCGGCGAT CGTCACCGCG
CACCTGCTCG GCGGCATCGG GCTGCTGGCG CTGCTGGCCG TGCAGGCGCA GCGTTATGCG
GTCGGCGCGC CGGGTGCGGC GTCCGGCACC GGGCCAGCGT CGAACGTCGC CACGCCGTTG
CTGCCGGCGC CGCTCGCGCT GCCGCCGGCC TTGCGCCGCG GCGTGCTGGC GGTGCTGCTG
CTGGTGATCG CGCAGGTCAC GCTGGGCGGC TGGGTGAGCA CCAACTACGC GGTGCTGGCC
TGCACCGACT TCCCGACCTG CCACGGCAGC TGGTGGCCGA CGATGGACTT CGCCAGCGGT
TTCACCTGGC AGCGCGAGCT CGGCCGTGAT GCCAGCGGCA ACTTCCTGCC CTTTGCCGCG
CTGACCGCGA TCCACTACAC CCACCGCCTC GCCGCCTTCA TCGTGCTCGG CGCGATGGCC
ACGCTGGCCT GGCGGCTGTG GCGCAGCGAT GCGCCCGGCG CGCCGGTCTA CGCCCGCTGG
ATCGCGCTGC TGGCCGGCTG GCAGCTGGCC AGCGGGCTGT CCAACGTGGT GCTCGGCTGG
CCGCTGCTGG CCGCACTCGC CCACACCGGT GGTGCGGCCG TGCTGGTATC CGTGCTCGCG
GCGCTGCTGG CATCCGGCCC TCGTCCTGTT CCTGCCTCGC AGCCCACCGC CCCGTCGCGC
GCCCGCCCGA ACGACATCTC GCTCTCACGC CCATGA
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| Protein sequence | MNSELIDLSP LAWLVLVGLL VAAGPLAWLV RRQRGASTPQ RLRALTLLTL FLTFDLVLFG
AYTRLSDSGL GCPDWPGCYG SATPLGAHSE ISQAQAALPS GPVTHGKAWV EMVHRYLASG
VGMLLTVLMV WSWRAARREG RGAGGIAPAW ATLSFVWVCL QGAFGALTVT MKLYPAIVTA
HLLGGIGLLA LLAVQAQRYA VGAPGAASGT GPASNVATPL LPAPLALPPA LRRGVLAVLL
LVIAQVTLGG WVSTNYAVLA CTDFPTCHGS WWPTMDFASG FTWQRELGRD ASGNFLPFAA
LTAIHYTHRL AAFIVLGAMA TLAWRLWRSD APGAPVYARW IALLAGWQLA SGLSNVVLGW
PLLAALAHTG GAAVLVSVLA ALLASGPRPV PASQPTAPSR ARPNDISLSR P
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