Gene Lcho_3823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3823 
Symbol 
ID6160447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4286691 
End bp4287572 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content64% 
IMG OID641666596 
Productcytochrome c oxidase subunit III 
Protein accessionYP_001792842 
Protein GI171060493 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.267917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCAG CGAGCAAGGG CGCAACGCCC TATTACTACA TTCCGGAGCC TTCGCGGCAT 
CCGGTGATGA TGTCGTTCGG TCTCTTTTTC GTCATCCTGG GCGCGGGCCA GTGGATCAAC
TCCCACACCT GGGGCGCCTA CGCGCTGGCC TTCGGCCTGA TGTGGGTGGC GTTCACGATG
CGCCAGTGGT TCGGTGAAGC CGCGGCCGAA AGCGAGCGCG GCCTCTACAG CGACCGCATC
GACGTCTCCT TCCGCTGGAG CATGGCCTGG TTCATCTTCT CCGAAGTGAT GTTCTTCGCC
GCCTTCTTCG GCGCGCTCTA CTGGGCTCGC GCGCAGTCGG TGCCGAGCCT GGGCAGCCTC
GAGAACGCGC TGCTATGGCC TGACTTCAAG GCGCTGTGGC CCAGCTCATC CCCCGGTGCC
ACCGCCTCGC CGGCCGGCAT CGTCGAGCCG TTCCAGGTCG TCGGCCCGTG GCCGATCCCG
ACCATCAACA CGGCGCTGCT GCTGACCTCG GGCGTGACGC TGACGATCGC CCACCACGCC
CTGATCGCCG GCCAGCGCGC CAAGACGATC GCCTGGATGT GGGTCACGGT GCTGCTCGGC
ATCGTCTTCC TGGGCTTCCA GGGTTACGAA TACGCGCACG CCTACAACGA CCTGAACCTC
AAGCTCTCGT CGGGCATCTA CGGTTCGACC TTCTTCATGC TGACCGGCTT CCACGGCTTC
CACGTCTTCG TGGGCATGCT GATGCTGCTG TTCATCACGA TCCGCCTGAT GAAGGGCCAC
TTCACGCCGA CGCGCCACTT CGGTTTCGAA GGCGCGGCCT GGTACTGGCA CTTCGTCGAC
GTGGTCTGGC TCGGCCTGTA CTTGGTCGTC TACTGGATCT GA
 
Protein sequence
MSAASKGATP YYYIPEPSRH PVMMSFGLFF VILGAGQWIN SHTWGAYALA FGLMWVAFTM 
RQWFGEAAAE SERGLYSDRI DVSFRWSMAW FIFSEVMFFA AFFGALYWAR AQSVPSLGSL
ENALLWPDFK ALWPSSSPGA TASPAGIVEP FQVVGPWPIP TINTALLLTS GVTLTIAHHA
LIAGQRAKTI AWMWVTVLLG IVFLGFQGYE YAHAYNDLNL KLSSGIYGST FFMLTGFHGF
HVFVGMLMLL FITIRLMKGH FTPTRHFGFE GAAWYWHFVD VVWLGLYLVV YWI