Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3823 |
Symbol | |
ID | 6160447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4286691 |
End bp | 4287572 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641666596 |
Product | cytochrome c oxidase subunit III |
Protein accession | YP_001792842 |
Protein GI | 171060493 |
COG category | [C] Energy production and conversion |
COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.267917 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCAG CGAGCAAGGG CGCAACGCCC TATTACTACA TTCCGGAGCC TTCGCGGCAT CCGGTGATGA TGTCGTTCGG TCTCTTTTTC GTCATCCTGG GCGCGGGCCA GTGGATCAAC TCCCACACCT GGGGCGCCTA CGCGCTGGCC TTCGGCCTGA TGTGGGTGGC GTTCACGATG CGCCAGTGGT TCGGTGAAGC CGCGGCCGAA AGCGAGCGCG GCCTCTACAG CGACCGCATC GACGTCTCCT TCCGCTGGAG CATGGCCTGG TTCATCTTCT CCGAAGTGAT GTTCTTCGCC GCCTTCTTCG GCGCGCTCTA CTGGGCTCGC GCGCAGTCGG TGCCGAGCCT GGGCAGCCTC GAGAACGCGC TGCTATGGCC TGACTTCAAG GCGCTGTGGC CCAGCTCATC CCCCGGTGCC ACCGCCTCGC CGGCCGGCAT CGTCGAGCCG TTCCAGGTCG TCGGCCCGTG GCCGATCCCG ACCATCAACA CGGCGCTGCT GCTGACCTCG GGCGTGACGC TGACGATCGC CCACCACGCC CTGATCGCCG GCCAGCGCGC CAAGACGATC GCCTGGATGT GGGTCACGGT GCTGCTCGGC ATCGTCTTCC TGGGCTTCCA GGGTTACGAA TACGCGCACG CCTACAACGA CCTGAACCTC AAGCTCTCGT CGGGCATCTA CGGTTCGACC TTCTTCATGC TGACCGGCTT CCACGGCTTC CACGTCTTCG TGGGCATGCT GATGCTGCTG TTCATCACGA TCCGCCTGAT GAAGGGCCAC TTCACGCCGA CGCGCCACTT CGGTTTCGAA GGCGCGGCCT GGTACTGGCA CTTCGTCGAC GTGGTCTGGC TCGGCCTGTA CTTGGTCGTC TACTGGATCT GA
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Protein sequence | MSAASKGATP YYYIPEPSRH PVMMSFGLFF VILGAGQWIN SHTWGAYALA FGLMWVAFTM RQWFGEAAAE SERGLYSDRI DVSFRWSMAW FIFSEVMFFA AFFGALYWAR AQSVPSLGSL ENALLWPDFK ALWPSSSPGA TASPAGIVEP FQVVGPWPIP TINTALLLTS GVTLTIAHHA LIAGQRAKTI AWMWVTVLLG IVFLGFQGYE YAHAYNDLNL KLSSGIYGST FFMLTGFHGF HVFVGMLMLL FITIRLMKGH FTPTRHFGFE GAAWYWHFVD VVWLGLYLVV YWI
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