| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3814 |
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| Symbol | gpsA |
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| ID | 6160621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4279051 |
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| End bp | 4280064 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641666587 |
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| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_001792833 |
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| Protein GI | 171060484 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.182859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCA CGGTATTGGG CGCAGGCGCC TGGGGCACGG CGGTGGCCGC ACAGGCTGCG
CTGCGCCATC CGACGCTGCT GTGGGGCCGC GACCCCGCGC AGATGGCCGA GATCGCCGCC
ACGCGGCGCA ATCAGCGCTA TCTGCCGGAC GCAGACCTGC CCGCCAGGCT GGTCTGCAGT
GGCGACTGGG ACGCGGCGCT GGCTCACGTC AGCGCCCGGG CCGGCACCGA TGCGGATGCG
AACGGCGCCG GCCTGGTGAT CGTCGCCACG CCGATGGCGG CCCTGCGCGA GATGCTGGCG
CGCATCCCGC AAGGTCTGCC GACGCTGTGG CTGTGCAAGG GCTTCGAGGC CGGCACCGGC
CTGCTCGGCC ACGAGATCGC CCGCGAGGTG GCGCCGCAGC TGGCCTGCGG CGTGCTGTCG
GGCCCGAGCT TCGCGCTCGA GGTGGCGCGC CAGCAGCCCA CCGCGCTGGT CGCCGCCAGC
CAGCATGAAA GCGTGCGCGA CGCCGCGGTG CGCGCGCTGC ACGGCGCCAG CCTGCGGGTC
TACGCGTCGG ACGACCCGGT CGGCGTCGAA GTAGGCGGCG CGGTCAAGAA CGTGCTGGCG
ATCGCCACCG GCATCGCCGA CGGCATGGGC CTGGGCCTGA ACGCGCGCGC CGCGCTGATC
ACGCGCGGCC TGGCCGAGAT GACGCGCCTG GGCCTGGCGC TGGGCGCACG CGCCGAGACC
TTCATGGGCT TGTCCGGGCT GGGCGATCTG GTGCTGACCG CCACCGGCGA CCTGTCACGC
AACCGCCGCG TCGGCCTGCG GCTGGCCGAC GGGCAGACGC TGGCGCAGAT CCTGGCCGAA
CTCGGCCATG TCTCCGAAGG CGTCTACAGC GCCGGCACGG TGCTCGAACG CGCCGGCCGG
CTGGGCGTCG ACATGCCGAT CACCGCCGCG GTGGTGGCCG TGCTGCAAGG CGGACTGGCC
CCGCGTGATG CGGTGGCGGC GCTGATGCAG CGCGAAGCCC GCGCCGAGAG CTGA
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| Protein sequence | MQITVLGAGA WGTAVAAQAA LRHPTLLWGR DPAQMAEIAA TRRNQRYLPD ADLPARLVCS
GDWDAALAHV SARAGTDADA NGAGLVIVAT PMAALREMLA RIPQGLPTLW LCKGFEAGTG
LLGHEIAREV APQLACGVLS GPSFALEVAR QQPTALVAAS QHESVRDAAV RALHGASLRV
YASDDPVGVE VGGAVKNVLA IATGIADGMG LGLNARAALI TRGLAEMTRL GLALGARAET
FMGLSGLGDL VLTATGDLSR NRRVGLRLAD GQTLAQILAE LGHVSEGVYS AGTVLERAGR
LGVDMPITAA VVAVLQGGLA PRDAVAALMQ REARAES
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