| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3813 |
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| Symbol | |
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| ID | 6160620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4278557 |
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| End bp | 4279018 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641666586 |
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| Product | preprotein translocase subunit SecB |
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| Protein accession | YP_001792832 |
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| Protein GI | 171060483 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1952] Preprotein translocase subunit SecB |
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| TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.211581 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGATG AACAAGACGC AGCGGGCGAG CAGCCCGTGT TCCAGATCCA GCGCGTCTAC
CTGAAAGACC TGTCGCTGGA ACAGCCCAAC TCGCCGCAGA TCCTGATCGA ACAGGGCCAG
CCGGCGGTCG ACGTCAACCT CGGCATCGAA GTGCAGCCGA TCGCCGACGG CGTGTTCGAA
GTGGCCGTCA GCGCCACCGT GACCACCAAG CTCGGCGAGC GCACGCTGTT CCTGTGCGAG
GCCAAGCAGG CCGGCATCTT CGAGATCCGC AACATCGACG CCGATCAGAT GCAGCCGATC
CTGGGCATCG CCTGCCCCGG CATCGTCTAC CCCTATCTGC GCGCCGTGGT GGCCGACATC
ATCAGCCGCG CCGGTTTCCC GCCGGTGCAC CTGGCCGAAG TCAACTTCCA GGCCATGTAC
GAAGCGCAGC AGCAAAGCGG CGCCCAGCAG CTCAACTCCT GA
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| Protein sequence | MADEQDAAGE QPVFQIQRVY LKDLSLEQPN SPQILIEQGQ PAVDVNLGIE VQPIADGVFE
VAVSATVTTK LGERTLFLCE AKQAGIFEIR NIDADQMQPI LGIACPGIVY PYLRAVVADI
ISRAGFPPVH LAEVNFQAMY EAQQQSGAQQ LNS
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