| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3808 |
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| Symbol | |
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| ID | 6160487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4272914 |
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| End bp | 4274371 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666581 |
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| Product | PASTA domain-containing protein |
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| Protein accession | YP_001792827 |
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| Protein GI | 171060478 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2815] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.309387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCACG ATGTCCTGAT CAGCTATTCG AGCCATGACC GGCTGGAGGC CGATGCAATT
TGCAATCGCC TCGAGTCCCA GGGCATCCGC TGCTGGATCG CCCCGCGCGA TGTGCCGCCG
GGCTCGGAGT ACGCCGATTC GATCGTCCAG GCGATCGAGA GTGCGCGCGT GATGGTGCTG
GTCTACAGCG CCCACGCCGA CGGGTCGAAA CAGGTCCGCC GCGAAGTCGA ACGTGCCGTC
AGCATCGGCC GCACGATCAT GCCGGTGCGG ATCCAGAACG CCGAGATGAG CAAGGCGTTC
AAGTACTACG TCGGCTCCAT CCATTGGCTC GACGCGATCA CGCCGCCGCT GGAGCAGCAC
ATCGACCGGC TCGGCCGGGA TATCCAGGCC GTGTTGTCGG CGCAGCCCGC CGCGCCGGGG
CCGGCGGCTG CCACGACGAC GCTCGGCTTG CCCCGGACGG CCCGGCCCGA CCCGGCGCCG
GCCGCCGAGG CGAGCGGCAC CTCCCGCAAG GGCCTGATGA TCGGCGGCGG CGTTGCCGTG
ACGGTCGCCC TGTTGGCGGG TGGCTACTTC CTGGGCCAGG CAACGAGAGA CGATCCGCTG
GTCGCGGCGC CGACGGCCGC AGGGCCACCG GTTGCGTCGC CGGCGGTTTC GCAGGCGGTT
TCGGAAGCGG TCGTCGCGCC GGCCACGTGG GTGCCGTCGG TCAACGACAG GTCCCGGCGC
GAGGCCAGCG AGTTGCTCGA GGCGGCCGGG CTCAAGGTCA AGCTCGTCGA GCAGGAACAT
GCCGAACTGC GCTTTCCGAA GGTGATCGGC ACCGACCCGG CCGCCGGTCA GGCCGTGCCC
GCCGACCGCG AGGTGACGCT GTACGTCTCG GGCATGCGCC TGCTGCCGTC CGTGCTCGAT
CTGCCGATCG AGAAGGCGAA GTCGACGATC CAGGATGCGG GCTTCTCCGC GCCGGTCGAG
ATCCGCGAGA CCGCGAGCCC CAAGCCCGAA GGCGTGGTGA TCGGCATGCA GCCGCCGGGT
GGCAGCCGGC ACTTCTCGAG CAAGCCGGTC GTGCTCGAGG TCTCGGCCCC GAAGGCACTG
CTCGCCGACC TCGTCAAGCG CCCCGTGGCC GAGGCCGAGC AGGCCCTGAA AGAGGCCCGC
TTCAACCCGC AGGTCGTTCG CGACTGGATT CCCGGCGCCG CGGTCGGGAC CGTCGCGGAG
ATGAAGCCCG CCGCCGGATC CCGCCTCAAC CCCGGCGACA CCGTGACCTT GCGTGTGGCC
GCGGCCGGCG GCTGGGTCTA TCACGCGGCG GGGCGGCAAC TCAAGGGCGG CCAGACCTTC
CGCATGGACA CGGCGGGCAA TCTCCGCACC GAACCGCGCT CGGGCAGCAA GACCCTCGAC
GTGCTGTCCA GGGGCCAGAT GGCGCGGGTG CTCGAGGCCT ACGGCGACGG CTGGCTCAAG
GTCGTGGTGC TCGACTGA
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| Protein sequence | MAHDVLISYS SHDRLEADAI CNRLESQGIR CWIAPRDVPP GSEYADSIVQ AIESARVMVL
VYSAHADGSK QVRREVERAV SIGRTIMPVR IQNAEMSKAF KYYVGSIHWL DAITPPLEQH
IDRLGRDIQA VLSAQPAAPG PAAATTTLGL PRTARPDPAP AAEASGTSRK GLMIGGGVAV
TVALLAGGYF LGQATRDDPL VAAPTAAGPP VASPAVSQAV SEAVVAPATW VPSVNDRSRR
EASELLEAAG LKVKLVEQEH AELRFPKVIG TDPAAGQAVP ADREVTLYVS GMRLLPSVLD
LPIEKAKSTI QDAGFSAPVE IRETASPKPE GVVIGMQPPG GSRHFSSKPV VLEVSAPKAL
LADLVKRPVA EAEQALKEAR FNPQVVRDWI PGAAVGTVAE MKPAAGSRLN PGDTVTLRVA
AAGGWVYHAA GRQLKGGQTF RMDTAGNLRT EPRSGSKTLD VLSRGQMARV LEAYGDGWLK
VVVLD
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