Gene Lcho_3803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3803 
Symbol 
ID6160791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp4268269 
End bp4268748 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content74% 
IMG OID641666576 
Productprotein of unknown function DUF395 YeeE/YedE 
Protein accessionYP_001792822 
Protein GI171060473 
COG category[R] General function prediction only 
COG ID[COG2391] Predicted transporter component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAA CCCCTGTTCG CGCCCGCCTG GGCGGCTTGG CCGCGGCGCT GGCCGGCGTG 
GTGTTCGGCG TCGGTCTGGC GCTGGCGCAG ATGGTCGACC CGCGCAAGGT GCTGGGTTTT 
CTCGACCTGG CCGGTGCCTG GGACGCCAGC CTGCTGTTCG TGCTGGGCGG CGCGGTGCTG 
GTGGCCGCGG CCGGTTTCCG CGTCGTGCTC AAGCGGACCG GGCCGGCGCT CGGCGACCGT 
TTCCACATCA GCAGCTGGAC CGCCATCGAC CGCCCGCTGA TCGTCGGCTC GGCGCTGTTC 
GGCATCGGCT GGGGCCTGGC GGGTTATTGC CCGGGGCCGG CGATCGCCTC GCTCGGTTTC 
GGCAACCCGG AGGCGCTGTG GTTCGTGCCG GCGATGGTCG CCGGCGCCGG GCTGCAGCGC 
TGGCAGGCGC ACCGGCGGGC CGCGCCCACG ACGGCCCAGG CCGCAGCCGA CGAGGTCTGA
 
Protein sequence
MTTTPVRARL GGLAAALAGV VFGVGLALAQ MVDPRKVLGF LDLAGAWDAS LLFVLGGAVL 
VAAAGFRVVL KRTGPALGDR FHISSWTAID RPLIVGSALF GIGWGLAGYC PGPAIASLGF 
GNPEALWFVP AMVAGAGLQR WQAHRRAAPT TAQAAADEV