| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3798 |
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| Symbol | |
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| ID | 6160786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4261450 |
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| End bp | 4263648 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666571 |
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| Product | CheA signal transduction histidine kinase |
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| Protein accession | YP_001792817 |
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| Protein GI | 171060468 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCG ACCAGGCACT CCAGACCTTC ATTTCCGAGA GCCGGGAACT GTTGGGCGAG
ATGGAGCAGG CCCTGCTCGG GCTTGAAGAG GCCGAGCAGA AAGACGAGCT GGTGAACGCG
ATCTTTCGCG CCGCGCACAC CATCAAGGGC TCGGCCGGGC TGTTCAGCCT GGACGCGATC
GTCGAATTCA CCCACGTGGT CGAAAGCGTG CTCGACAAGG TTCGCGCCGG CCGGATCGCG
ATCGGCGACG CGCTGGTGGT GCTGCTGCTG GCCTGCCGCG ACCACATCTG CGCGCTGATC
GACACGGTCG AGACGAACCA GGGCGACTTC GAGGCGGCGC TGCTGGCCCA GGGCGAGCCG
CTGCTGGGGC AACTGCGCGG CCATCTCGGC GTGCGGGCCG ACCCGCCAGC CGCCGCCGAC
ACCGGCGCCC GCACCCTGAT CGCCGACGCC ACCCGGCCGG GCAACGGCGT GGTCGAGCGC
ATCGACCGCG ACAGCGCCAC CACCGACTGC TGGCACATCT CGCTGCGCTT CGGCCCCGAC
GTGCTGAGGA ACGGCCTCGA CCCGCTGTCG TTCATCCGCT ACCTGCAGAC GCTGGGCCGC
ATCGCCGGCG CGGCGATCCA CACCGAGGCG CTGCCCGAGG CCGGGCAGAT GGATCCGGAG
CGCTGCTATC TGGGCTTCGA GCTGGCACTG CGCACCGATG CCGACAAGAC GACGATCGAG
AACGTGTTCG AGTTCGTGCG CGACGAGTGC GAGCTGCGCA TCCTGCCGCC GCACAGCCGC
ATCGGCGACT ACATCCGCCT GATCGAGCAG CAGGGCGAAG CCGCCCGCCT GGGCGAGATG
CTGCTGCGCT GCGGCACCCT GACCGCGCAG GAGCTCGACC ACGCCATCAA CGACCAGGCC
GCGCACCCCG ACAAGCTGAT CGGCGCCATC CTGGTCGACG ACGGCGTGGT GCAGCCCGAG
GTGGTGGAGG CCGCGCTGGT CAGGCAGAAG CAGGTGCGCG ACAGCGGCGC GCACGAGAGC
CGCTCGATCC GCATCGACGC CGACAAGCTC GACCAGCTCA TCAACCTGGT CGGCGAACTC
ATCATCGCCG GCGCCAACGT CAACCAGATC GCCCAGCGGG CGCAGTTTGC CGACCTGCAG
GAAAGCACCT CGAAGCTGTC GACGCTGGTG CAGGAGGTGC GCGACAGCGC GCTGCAACTG
CGCATGGTGC GCATCGGCGC CACCTTCAGC CGCTTCCAGC GTGTGGTGCA CGACGTCTCG
CGCGAGCTCG GCAAGGACAT CGCGCTGGTC ATCCAGGGCG AGGACACCGA GCTCGACAAG
ACCGTGGTCG AGAAGATCAG CGACCCGCTG ATGCACCTGG TGCGCAACGC GATGGACCAC
GGCATCGAAT CGGCGGCGCT GCGGCTCGAA CGCGGCAAGC CGGCGCAGGG CCGGCTCGAA
CTCAACGCCT TCCACGACTC GGGCAGCATC GTCATCACCG TGCGCGACGA CGGCGGCGGC
CTCAGGCGCG AGCGCATCCT GGCCAAGGCG ATCGAGCGCG GCCTGGTCGA AGCCGGCCAC
ACGCTCAGCG ACAGCGAGGT CTACGGGCTG ATCTTCGAGC CGGGCTTCTC GACCGCCGAG
CAGGTCACCA ACCTGTCGGG GCGCGGTGTC GGGCTGGACG TGGTCAAGCG CAACATCACG
GCGCTGCGCG GTTCGGTCGA GATCGCCAGC ACCGAGGGCA CGGGCACCAC CGTGACGGTG
CGCCTGCCGC TGACGCTGGC CATCATCGAC GGCTTCCTGG TCGGCGCCGG CAAGTCGGTC
TACGCGATCC CGCTCGACAT GATCGAGGAG TGCATCGCCT ACAGCGCCGA GCCCGGCCAC
GACTACACCA ACCTGCGCGG CCAGGTGCTG CCCTTCATCC GCCTGCGCGA GATCTTCGCG
CTGAACGCGC CGCCGCCGCG CAGCCAGAAC ATCGTCGTGC TCAAGCACGG CAAGCAGCGC
GCCGGCCTGG TGGTCGACCG CCTGATGGGC GAGTTCCAGA CCGTCATCAA GCCGCTCGAG
GCGATGTTCG GCCACGTCAA GTGCATCAGC GGCTCGACCA TCCTCGGCAG TGGCGAGGTC
GCCCTGATCC TCGACGTGCC GGCCCTCATC AACCGTTGCA TCAACCACGA CAAGAGAAGC
CTGGCGCAGG GCCAGGGGCT CGAATCGATC TCCCCATGA
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| Protein sequence | MNIDQALQTF ISESRELLGE MEQALLGLEE AEQKDELVNA IFRAAHTIKG SAGLFSLDAI
VEFTHVVESV LDKVRAGRIA IGDALVVLLL ACRDHICALI DTVETNQGDF EAALLAQGEP
LLGQLRGHLG VRADPPAAAD TGARTLIADA TRPGNGVVER IDRDSATTDC WHISLRFGPD
VLRNGLDPLS FIRYLQTLGR IAGAAIHTEA LPEAGQMDPE RCYLGFELAL RTDADKTTIE
NVFEFVRDEC ELRILPPHSR IGDYIRLIEQ QGEAARLGEM LLRCGTLTAQ ELDHAINDQA
AHPDKLIGAI LVDDGVVQPE VVEAALVRQK QVRDSGAHES RSIRIDADKL DQLINLVGEL
IIAGANVNQI AQRAQFADLQ ESTSKLSTLV QEVRDSALQL RMVRIGATFS RFQRVVHDVS
RELGKDIALV IQGEDTELDK TVVEKISDPL MHLVRNAMDH GIESAALRLE RGKPAQGRLE
LNAFHDSGSI VITVRDDGGG LRRERILAKA IERGLVEAGH TLSDSEVYGL IFEPGFSTAE
QVTNLSGRGV GLDVVKRNIT ALRGSVEIAS TEGTGTTVTV RLPLTLAIID GFLVGAGKSV
YAIPLDMIEE CIAYSAEPGH DYTNLRGQVL PFIRLREIFA LNAPPPRSQN IVVLKHGKQR
AGLVVDRLMG EFQTVIKPLE AMFGHVKCIS GSTILGSGEV ALILDVPALI NRCINHDKRS
LAQGQGLESI SP
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