| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3786 |
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| Symbol | |
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| ID | 6161831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4245066 |
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| End bp | 4245608 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666559 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001792805 |
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| Protein GI | 171060456 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTCG AAGAAGCCCT GCCGCACCTG CCCCGGCTGC GCCGCTACGC CCGGCTGCTG
ACGGGTGACG CGGCGCGCGC CGACGATCTG GTGCAGGACA CGCTGGAGCG GGCCGCCCGC
AAGTGGCTGC TCTGGCGACC CGCGGCGGGC GCCTTCGTCG ATGCCCAGGA CCGCGCCGGC
TCGCTGCGCG CCTGGCTGCT GACCCTGATG CACAACCTCT TCCTCAACCA GCTGCGCGAC
CGCCGCGAGC ACCTCTACGA GGAATACGCG CCCGAGCGCG AGCAGTCGCA CGAACGCGCG
CACGAGCCGC ATCGGCAGTT GCAGACCCGG CTCGATCTCG AGAAGGCGCT CGCCTGCCTG
AGCCCGCCGG CGCGCGAGGT GCTGCTGCTG GTGTGCGTCG AAGAACTCTC GTATGAACAG
GCCGCGCTGG TGCTCGGCGT GCCGGTGGGC ACGGTGATGT CGCGCCTGTC GCGTGCCCGT
GAACGGCTGC GCATGCTGAT GGACGGGCAA GCCACGGCCG CGCCGCTGCG TGTGGTCAAG
TAA
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| Protein sequence | MSVEEALPHL PRLRRYARLL TGDAARADDL VQDTLERAAR KWLLWRPAAG AFVDAQDRAG
SLRAWLLTLM HNLFLNQLRD RREHLYEEYA PEREQSHERA HEPHRQLQTR LDLEKALACL
SPPAREVLLL VCVEELSYEQ AALVLGVPVG TVMSRLSRAR ERLRMLMDGQ ATAAPLRVVK
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