| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3784 |
|---|
| Symbol | |
|---|
| ID | 6161829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 4242618 |
|---|
| End bp | 4243991 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641666557 |
|---|
| Product | oxidoreductase molybdopterin binding |
|---|
| Protein accession | YP_001792803 |
|---|
| Protein GI | 171060454 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2041] Sulfite oxidase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCATCCC ACGAACAAGG CTCCGGCCGC CTCATCAAGG CGCCCGAGAA CTTCATCGAT
CCAGCCGGCG TGCGCCAGGT GTTCGAAGAA GCCAAGACAG GTCGGCGAGA CTTCATCCGT
CGCGCGTTCG CCTCGGCCTC CGCGGCCGTT GCCGCACCGC TGGCGCTGGC GCAGTCGAAC
CCGCTGCCCC ACGCGGGCGG CGACCCCAAC ATCCTCGAGC TGCCCGCGCA CAGCACCGGG
CTGGGCCAGT CGGTGGCCAC CGACGGCTAC GGCAAGCCGT CGAAGTTCGA GACCAACGTG
CAGCGCCGGC CGAGCCCGGG GCTGACGCAG ACGGCGCAGT CGTCGGTGTC GTTCGCGCCG
CTGCAGAGCC TGTTCGGCAT CGTCACGCCC AGCGGCCTGC ACTTCGAGCG CCACCACCAG
GGCTGGTGGG ACGTCGATCC GAGCAAGCAC CGCCTGATGA TCAACGGCAG CGACGACCAG
CTCGTCAAGA CGCCCAAGGT CTTCACGATG GACGAGGTGA TGCGGCTGCC CGCGGTGTCG
CGCTTCCACT TCATCGAATG CGGCGCCAAC ACCGGCATGG AATGGGGCAA CGTGGCCGTG
CCCACGGTGC AGTACAGCCA CGGCATGCTC AGCTGCAGCG AGTTCACCGG CGTGCCGCTG
AAGATCCTGC TCGACCTGTG CGGTGTCGAC TACAAGCGCG GCCGCTACGT GCTGGCCGAA
GGCGCCGACG GTTCGTCGAT GACTCGCACC ATCCCGATGG AGCTGATCGA GTCGGGCGAG
GTGCTGGTCG CCTACGGCCA GAACGGCGAG ATGCTGCGGC CCGAAAACGG CTACCCGCTG
CGTCTGGTGG TGCCGGGCGT GCAGGGCGTG AGCTGGGTCA AGTACCTGCG CCGCATCGAG
GTGGGTGACC AGCCTTACGG CAGCAAGGAC GAGGCGGTGC ACTACATCGA CCTGATGCCC
GGCGGCCAGC ACCGCCAGTA CACCAGCATC CAGGAGTGCA AGAGCGTGGT GACCACGCCT
TCGGGCGGCC AGGTGCTGCT CGACAAGGGC TTCTACAACA TCAGCGGCCT GGCCTGGTCG
GGCCGCGGCA AGGTCAAGAA GGTCGACGTG TCGGTCGACG GCGGGCGCAA CTGGCGTCCG
GCCCGGCTCG AGACGGTGCT CAGCAAGGCG CTGACCCGCT TCAACATCGA CTGGGTGTGG
GACGGCAAAC CCGCCATCAT CCAGAGCCGC GCCACCGACG AGACCGGCTA CGTGCAGCCG
AGCTATCGGC AGCTGCGCGC GGTGCGTGGC ACGCGCTCGA TCTATCACAA CAACTCGATC
CAGTCGTGGC TGGTGCAGGA AAGTGGCGAG GTGAAGAATG TCCAGCTCTC CTAA
|
|---|
| Protein sequence | MSSHEQGSGR LIKAPENFID PAGVRQVFEE AKTGRRDFIR RAFASASAAV AAPLALAQSN
PLPHAGGDPN ILELPAHSTG LGQSVATDGY GKPSKFETNV QRRPSPGLTQ TAQSSVSFAP
LQSLFGIVTP SGLHFERHHQ GWWDVDPSKH RLMINGSDDQ LVKTPKVFTM DEVMRLPAVS
RFHFIECGAN TGMEWGNVAV PTVQYSHGML SCSEFTGVPL KILLDLCGVD YKRGRYVLAE
GADGSSMTRT IPMELIESGE VLVAYGQNGE MLRPENGYPL RLVVPGVQGV SWVKYLRRIE
VGDQPYGSKD EAVHYIDLMP GGQHRQYTSI QECKSVVTTP SGGQVLLDKG FYNISGLAWS
GRGKVKKVDV SVDGGRNWRP ARLETVLSKA LTRFNIDWVW DGKPAIIQSR ATDETGYVQP
SYRQLRAVRG TRSIYHNNSI QSWLVQESGE VKNVQLS
|
|---|
| |